ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2013
Integrated consensus map of cultivated peanut and wild relatives reveals structures of the A and B genomes of Arachis and divergence of the legume genomes.
Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.
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Who cites it
55 citing papers in PubMed.
- Peanut genome resource: a functional genomics platform for Arachis hypogaea.Plant & cell physiology · 2026Article
- Integrative genomics and genetics from evolutionary insights to precision breeding in peanuts (Arachis Hypogaea L.).Functional & integrative genomics · 2025Review
- Validation and identification of promising gene specific markers governing foliar disease resistance in groundnut (Arachis hypogaea L.).Molecular biology reports · 2024Article
- Detection of two homologous major QTLs and development of diagnostic molecular markers for sucrose content in peanut.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Identification and characterization of transposable element AhMITE1 in the genomes of cultivated and two wild peanuts.BMC genomics · 2022Article
- Meta-QTL analysis and identification of candidate genes for drought tolerance in bread wheat (Physiology and molecular biology of plants : an international journal of functional plant biology · 2020Article
- Pod and Seed Trait QTL Identification To Assist Breeding for Peanut Market Preferences.G3 (Bethesda, Md.) · 2020Article
- High-density SNP map facilitates fine mapping of QTLs and candidate genes discovery for Aspergillus flavus resistance in peanut (Arachis hypogaea).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- Dissection of the genetic basis of oil content in Chinese peanut cultivars through association mapping.BMC genetics · 2020Article
- Brazilian Kayabi Indian accessions of peanut, Arachis hypogaea (Fabales, Fabaceae): origin, diversity and evolution.Genetics and molecular biology · 2020Article
- Whole-genome resequencing-based QTL-seq identified AhTc1 gene encoding a R2R3-MYB transcription factor controlling peanut purple testa colour.Plant biotechnology journal · 2020Article
- Defining the function of SUMO system in pod development and abiotic stresses in Peanut.BMC plant biology · 2019Article
- A new source of root-knot nematode resistance from Arachis stenosperma incorporated into allotetraploid peanut (Arachis hypogaea).Scientific reports · 2019Article
- Genome-wide identification of microsatellite markers from cultivated peanut (Arachis hypogaea L.).BMC genomics · 2019Article
- Genetics, genomics and breeding of groundnut (Plant breeding = Zeitschrift fur Pflanzenzuchtung · 2019Review
- Genetic imprints of domestication for disease resistance, oil quality, and yield component traits in groundnut (Arachis hypogaea L.).Molecular genetics and genomics : MGG · 2019Article
- Article
- SNP genotyping reveals major QTLs for plant architectural traits between A-genome peanut wild species.Molecular genetics and genomics : MGG · 2018Article
- High-Density Genetic Map Construction and Identification of QTLs Controlling Oleic and Linoleic Acid in Peanut using SLAF-seq and SSRs.Scientific reports · 2018Article
- Chromosomes A07 and A05 associated with stable and major QTLs for pod weight and size in cultivated peanut (Arachis hypogaea L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
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Authors and funding
17 authors.
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Abstract
The complex, tetraploid genome structure of peanut (Arachis hypogaea) has obstructed advances in genetics and genomics in the species. The aim of this study is to understand the genome structure of Arachis by developing a high-density integrated consensus map. Three recombinant inbred line populations derived from crosses between the A genome diploid species, Arachis duranensis and Arachis stenosperma; the B genome diploid species, Arachis ipaënsis and Arachis magna; and between the AB genome tetraploids, A. hypogaea and an artificial amphidiploid (A. ipaënsis × A. duranensis)(4×), were used to construct genetic linkage maps: 10 linkage groups (LGs) of 544 cM with 597 loci for the A genome; 10 LGs of 461 cM with 798 loci for the B genome; and 20 LGs of 1442 cM with 1469 loci for the AB genome. The resultant maps plus 13 published maps were integrated into a consensus map covering 2651 cM with 3693 marker loci which was anchored to 20 consensus LGs corresponding to the A and B genomes. The comparative genomics with genome sequences of Cajanus cajan, Glycine max, Lotus japonicus, and Medicago truncatula revealed that the Arachis genome has segmented synteny relationship to the other legumes. The comparative maps in legumes, integrated tetraploid consensus maps, and genome-specific diploid maps will increase the genetic and genomic understanding of Arachis and should facilitate molecular breeding.
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