Evidence map›Paper›PMID 23314747›Full record

ArticleThe EMBO journal2013

Myb-domain protein Teb1 controls histone levels and centromere assembly in fission yeast.

Luis P Valente, Pierre-Marie Dehé, Michael Klutstein, Sofia Aligianni, Stephen Watt, Jürg Bähler, Julia Promisel Cooper

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

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  7. Frontiers in microbiology · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Luis P ValenteCancer Research UK, London Research Institute, London WC2A 3LY, UK.
Pierre-Marie Dehé
Michael Klutstein
Sofia Aligianni
Stephen Watt
Jürg Bähler
Julia Promisel Cooper
Cancer Research UK · GBUniversity College London · GBUniversity of Coimbra · PT

Funding

Telomere BiologyZIABC011519 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI COOPER, JULIA · 2013 to 2020
$13.1M
Cancer Research UKWellcome Trust 095598
6 · The paper itself

Abstract

The TTAGGG motif is common to two seemingly unrelated dimensions of chromatin function-the vertebrate telomere repeat and the promoter regions of many Schizosaccharomyces pombe genes, including all of those encoding canonical histones. The essential S. pombe protein Teb1 contains two Myb-like DNA binding domains related to those found in telomere proteins and binds the human telomere repeat sequence TTAGGG. Here, we analyse Teb1 binding throughout the genome and the consequences of reduced Teb1 function. Chromatin immunoprecipitation (ChIP)-on-chip analysis reveals robust Teb1 binding at many promoters, notably including all of those controlling canonical histone gene expression. A hypomorphic allele, teb1-1, confers reduced binding and reduced levels of histone transcripts. Prompted by previously suggested connections between histone expression and centromere identity, we examined localization of the centromeric histone H3 variant Cnp1 and found reduced centromeric binding along with reduced centromeric silencing. These data identify Teb1 as a master regulator of histone levels and centromere identity.

Indexed as

Blotting, SouthernBlotting, WesternCentromereChromatin ImmunoprecipitationChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA PrimersElectrophoresis, Polyacrylamide GelFlow CytometryFluorescent Antibody Technique, IndirectGene Expression ProfilingGene Expression Regulation, FungalHistonesMicroarray AnalysisMutagenesisSchizosaccharomycesChromosomal Proteins, Non-HistoneCnp1 protein, S pombeDNA-Binding ProteinsDNA PrimersHistonesSchizosaccharomyces pombe ProteinsTeb1 protein, S pombeTranscription Factors

Identifiers

PMID23314747
PMCPMC3567493
OpenAlexW2154285903

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.