Evidence map›Paper›PMID 23314186›Full record

Trial reportHuman molecular genetics2013

Genetic variation associated with circulating monocyte count in the eMERGE Network.

David R Crosslin, Andrew McDavid, Noah Weston, Xiuwen Zheng, Eugene Hart, Mariza de Andrade, Iftikhar J Kullo, Catherine A McCarty, Kimberly F Doheny, Elizabeth Pugh and 56 more

Open access · bronzeAbstract readClinical TrialMulticenter Study
In one paragraph

Trial report in Human molecular genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 2 pooled it
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 2 syntheses or guidelines pooled it, 62 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. The role of interferon regulatory factors in atherosclerosis.Frontiers in cardiovascular medicine · 2025
    Review
  5. Article
  6. Identification of Two Genetic Loci Associated with Leukopenia after Chemotherapy in Patients with Breast Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2022
    Article
  7. Article
  8. Review
  9. Article
  10. Pyroptosis, metabolism, and tumor immune microenvironment.Clinical and translational medicine · 2021
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. CaJournal of clinical medicine · 2019
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

66 authors at 20 institutions in 6 countries.

David R CrosslinDepartment of Medicine, Division of Medical Genetics, University of Washington, Seattle, WA, USA. davidcr@u.washington.edu
Andrew McDavid
Noah Weston
Xiuwen Zheng
Eugene Hart
Mariza de Andrade
Iftikhar J Kullo
Catherine A McCarty
Kimberly F Doheny
Elizabeth Pugh
Abel Kho
M Geoffrey Hayes
Marylyn D Ritchie
Alexander Saip
Dana C Crawford
Paul K Crane
Katherine Newton
David S Carrell
Carlos J Gallego
Michael A Nalls
Rongling Li
Daniel B Mirel
Andrew Crenshaw
David J Couper
Toshiko Tanaka
Frank J A van Rooij
Ming-Huei Chen
Albert V Smith
Neil A Zakai
Qiong Yango
Melissa Garcia
Yongmei Liu
Thomas Lumley
Aaron R Folsom
Alex P Reiner
Janine F Felix
Abbas Dehghan
James G Wilson
Joshua C Bis
Caroline S Fox
Nicole L Glazer
L Adrienne Cupples
Josef Coresh
Gudny Eiriksdottir
Vilmundur Gudnason
Stefania Bandinelli
Timothy M Frayling
Aravinda Chakravarti
Cornelia M van Duijn
David Melzer
Daniel Levy
Eric Boerwinkle
Andrew B Singleton
Dena G Hernandez
Dan L Longo
Jacqueline C M Witteman
Bruce M Psaty
Luigi Ferrucci
Tamara B Harris
Christopher J O'Donnell
Santhi K Ganesh
CHARGE Hematology Working Group
Eric B Larson
Chris S Carlson
Gail P Jarvik
electronic Medical Records and Genomics (eMERGE) Network
Erasmus MC · NLKaiser Permanente Washington Health Research Institute · USBroad Institute · USBoston University · USCancer Research And Biostatistics · USCenter for Inherited Blood Disorders · USFred Hutch Cancer Center · USGeneral Department of Preventive Medicine · VNHuman Genome Sciences (United States) · USNational Institute on Drug Abuse · USNational Institutes of Health · USNIHR Leicester Cardiovascular Biomedical Research Unit · GBUniversity of Iceland · ISAzienda Sanitaria di Firenze · ITBrigham and Women's Hospital · USGroup Health Cooperative · USHarvard University · USIcelandic Heart Association · ISJackson Memorial Hospital · USJohns Hopkins University · US

Funding

Institute for Clinical and Translational Research (UL1)UL1RR025005 · NCRR · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2007 to 2011
$75.8M
Framingham Project/LevyZIAHL006001 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI LEVY, DANIEL · 2009 to 2025
$51.1M
Furthering scientific understanding of mechanisms underlying resilience to the effects of AD pathology by incorporating state of the art quantification of gliosis, inflammation, & synaptic toxicityU01AG006781 · NIA · UNIVERSITY OF WASHINGTON · PI CRANE, PAUL K, LARSON, ERIC B · 1986 to 2020
$39.3M
JH/CIDR Genotyping for Genome-Wide Association StudiesU01HG004438 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2007 to 2011
$24.2M
A Center for GEI Association StudiesU01HG004424 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GABRIEL, STACEY · 2007 to 2010
$21.4M
Genome-Wide Association Analysis in Essential Hypertension (FEHGAS study)R01HL086694 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ARAVINDA CHAKRAVARTI · 2007 to 2026
$21.2M
Epidemiology of Venous Thrombosis & Pulmonary EmbolismR01HL059367 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI TANG, WEIHONG · 1998 to 2024
$11.8M
CHARGE Consortium: Omics Discovery for CVD and Aging PhenotypesR01HL105756 · NHLBI · UNIVERSITY OF WASHINGTON · PI Bruce M Psaty, NICHOLAS L SMITH · 2011 to 2026
$9.5M
Vanderbilt Genome-Electronic Records ProjectU01HG004603 · NHGRI · VANDERBILT UNIVERSITY · PI RODEN, DAN M · 2007 to 2011
$7.3M
Framingham Heart Study/FoxZIAHL006094 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI FOX, CAROLINE · 2010 to 2015
$6.9M
Thrombosis Genetics, MI and Stroke in Older AdultsR01HL071862 · NHLBI · UNIVERSITY OF WASHINGTON · PI REINER, ALEXANDER P · 2003 to 2012
$4.3M
Development and Use of Network Infrastructure for High-Throughput GWA StudiesU01HG004610 · NHGRI · KAISER FOUNDATION HEALTH PLAN OF WASHINGTON · PI LARSON, ERIC B · 2007 to 2010
$4.2M
Intramural NIH HHS Z01 AG000932NCRR NIH HHS UL1 RR025005NCRR NIH HHS UL1RR025005NHGRI NIH HHS HHSN268200782096CNHGRI NIH HHS U01 HG004402NHGRI NIH HHS U01HG004402NHGRI NIH HHS U01 HG004424NHGRI NIH HHS U01 HG004438NHGRI NIH HHS U01 HG004599NHGRI NIH HHS U01 HG004603NHGRI NIH HHS U01 HG004608NHGRI NIH HHS U01 HG004609NHGRI NIH HHS U01 HG004610NHGRI NIH HHS U01 HG006378NHGRI NIH HHS U01 HG006389NHGRI NIH HHS U01 HG04599NHLBI NIH HHS N01 HC025195NHLBI NIH HHS N01 HC055015NHLBI NIH HHS N01 HC055016NHLBI NIH HHS N01 HC055018NHLBI NIH HHS N01 HC055019NHLBI NIH HHS N01 HC055020NHLBI NIH HHS N01 HC055021NHLBI NIH HHS N01 HC055022NHLBI NIH HHS N01-HC-25195NHLBI NIH HHS N01-HC-55015NHLBI NIH HHS N01-HC-55016NHLBI NIH HHS N01-HC-55018NHLBI NIH HHS N01-HC-55019NHLBI NIH HHS N01-HC-55020NHLBI NIH HHS N01-HC-55021NHLBI NIH HHS N01-HC-55022NHLBI NIH HHS N02-HL-64278NHLBI NIH HHS R01 HL059367NHLBI NIH HHS R01 HL-071862NHLBI NIH HHS R01 HL071862NHLBI NIH HHS R01 HL086694NHLBI NIH HHS R01HL086694NHLBI NIH HHS R01 HL087641NHLBI NIH HHS R01HL087641NHLBI NIH HHS R01 HL105756NHLBI NIH HHS R01HL59367NIA NIH HHS 1R01AG032098-01A1NIA NIH HHS AG000932-02NIA NIH HHS K23 AG000932NIA NIH HHS N01 AG012100NIA NIH HHS N01 AG062101NIA NIH HHS N01 AG062103NIA NIH HHS N01 AG062106NIA NIH HHS N01-AG-12100NIA NIH HHS N01AG62101NIA NIH HHS N01AG62103NIA NIH HHS N01AG62106NIA NIH HHS N01-AG-821336NIA NIH HHS N01-AG-916413NIA NIH HHS R01 AG032098NIA NIH HHS U01 AG006781NIA NIH HHS U01 AG06781NIMHD NIH HHS R01 MD009164
6 · The paper itself

Abstract

With white blood cell count emerging as an important risk factor for chronic inflammatory diseases, genetic associations of differential leukocyte types, specifically monocyte count, are providing novel candidate genes and pathways to further investigate. Circulating monocytes play a critical role in vascular diseases such as in the formation of atherosclerotic plaque. We performed a joint and ancestry-stratified genome-wide association analyses to identify variants specifically associated with monocyte count in 11 014 subjects in the electronic Medical Records and Genomics Network. In the joint and European ancestry samples, we identified novel associations in the chromosome 16 interferon regulatory factor 8 (IRF8) gene (P-value = 2.78×10(-16), β = -0.22). Other monocyte associations include novel missense variants in the chemokine-binding protein 2 (CCBP2) gene (P-value = 1.88×10(-7), β = 0.30) and a region of replication found in ribophorin I (RPN1) (P-value = 2.63×10(-16), β = -0.23) on chromosome 3. The CCBP2 and RPN1 region is located near GATA binding protein2 gene that has been previously shown to be associated with coronary heart disease. On chromosome 9, we found a novel association in the prostaglandin reductase 1 gene (P-value = 2.29×10(-7), β = 0.16), which is downstream from lysophosphatidic acid receptor 1. This region has previously been shown to be associated with monocyte count. We also replicated monocyte associations of genome-wide significance (P-value = 5.68×10(-17), β = -0.23) at the integrin, alpha 4 gene on chromosome 2. The novel IRF8 results and further replications provide supporting evidence of genetic regions associated with monocyte count.

Indexed as

Genome-Wide Association StudyLeukocyte CountAdultAgedAtherosclerosisChemokine Receptor D6Chromosomes, HumanFemaleGATA2 Transcription FactorHumansIntegrin alpha4Interferon Regulatory Factor-8Interferon Regulatory FactorsMaleMembrane ProteinsMiddle AgedACKR2 protein, humanChemokine Receptor D6GATA2 protein, humanGATA2 Transcription FactorIntegrin alpha4Interferon Regulatory Factor-8Interferon Regulatory FactorsMembrane ProteinsReceptors, ChemokineReceptors, Lysophosphatidic Acidribophorin

Identifiers

PMID23314186
PMCPMC3633369
OpenAlexW2147383712

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.