Evidence map›Paper›PMID 23308253›Full record

ArticlePloS one2013

Atypical features of Thermus thermophilus succinate:quinone reductase.

Olga Kolaj-Robin, Mohamed R Noor, Sarah R O'Kane, Frauke Baymann, Tewfik Soulimane

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Olga Kolaj-RobinChemical and Environmental Sciences Department and Materials & Surface Science Institute, University of Limerick, Limerick, Ireland.
Mohamed R Noor
Sarah R O'Kane
Frauke Baymann
Tewfik Soulimane
University of Limerick · IECentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Thermus thermophilus succinate:quinone reductase (SQR), serving as the respiratory complex II, has been homologously produced under the control of a constitutive promoter and subsequently purified. The detailed biochemical characterization of the resulting wild type (wt-rcII) and His-tagged (rcII-His(8)-SdhB and rcII-SdhB-His(6)) complex II variants showed the same properties as the native enzyme with respect to the subunit composition, redox cofactor content and sensitivity to the inhibitors malonate, oxaloacetate, 3-nitropropionic acid and nonyl-4-hydroxyquinoline-N-oxide (NQNO). The position of the His-tag determined whether the enzyme retained its native trimeric conformation or whether it was present in a monomeric form. Only the trimer exhibited positive cooperativity at high temperatures. The EPR signal of the [2Fe-2S] cluster was sensitive to the presence of substrate and showed an increased rhombicity in the presence of succinate in the native and in all recombinant forms of the enzyme. The detailed analysis of the shape of this signal as a function of pH, substrate concentration and in the presence of various inhibitors and quinones is presented, leading to a model for the molecular mechanism that underlies the influence of succinate on the rhombicity of the EPR signal of the proximal iron-sulfur cluster.

Indexed as

Bacterial ProteinsElectron Spin Resonance SpectroscopyElectron Transport Complex IIHot TemperatureHydroxyquinolinesKineticsNitro CompoundsOxaloacetic AcidOxidation-ReductionPromoter Regions, GeneticPropionatesProtein MultimerizationQuinonesRecombinant Fusion ProteinsSubstrate SpecificitySuccinic Acid3-nitropropionic acidBacterial ProteinsElectron Transport Complex IIHydroxyquinolinesNitro Compoundsnonyl-4-hydroxyquinoline-N-oxideOxaloacetic AcidPropionatesQuinonesRecombinant Fusion ProteinsSuccinic Acid

Identifiers

PMID23308253
PMCPMC3538594
OpenAlexW2017401060

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.