Evidence map›Paper›PMID 23307300›Full record

ArticleMolecular biology reports2013

Development of a robust, low cost stem-loop real-time quantification PCR technique for miRNA expression analysis.

Samira Mohammadi-Yeganeh, Mahdi Paryan, Siamak Mirab Samiee, Masoud Soleimani, Ehsan Arefian, Keyhan Azadmanesh, Ehsan Mostafavi, Reza Mahdian, Morteza Karimipoor

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Article in Molecular biology reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Samira Mohammadi-YeganehMolecular Medicine Department, Biotechnology Research Center, Pasteur Institute of Iran, P.O. Box 1316943551, Tehran, Iran.
Mahdi Paryan
Siamak Mirab Samiee
Masoud Soleimani
Ehsan Arefian
Keyhan Azadmanesh
Ehsan Mostafavi
Reza Mahdian
Morteza Karimipoor

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Development of a rapid and accurate quantification method for the detection of microRNAs (miRNAs) has been desired, in particular, when they are differently expressed in normal and pathological conditions. However, various methods for the quantification of small non-coding RNAs as well as miRNAs have been described. These methods mainly include hybridization-based approaches such as primer extension, northern blotting, microarray profiling, and reverse transcription (RT) PCR. Here, we developed a simple and rapid method based on stem-loop primer-based real-time PCR assay for sensitive and accurate detection of mature miRNAs. Initially, a miRNA-specific stem-loop RT primer is used for RT, which is followed by TaqMan real-time PCR assay using specific forward primer in combination with universal reverse primer and TaqMan probe. The assay has shown high sensitivity (≤50 copies/reaction) for miRNA detection in two breast cancer cell lines, MCF-7 and MDA-MB-231. This assay might be implicated as a rapid and cost effective method for the detection of small non-coding RNAs.

Indexed as

Inverted Repeat SequencesCell LineGene Expression ProfilingHumansMicroRNAsReal-Time Polymerase Chain ReactionReproducibility of ResultsRNA, MessengerSensitivity and SpecificityMicroRNAsRNA, Messenger

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.