Evidence map›Paper›PMID 23307247›Full record

ArticleMedical oncology (Northwood, London, England)2013

A signature for induced pluripotent stem cell-associated genes in colorectal cancer.

Yu-Hong Liu, Ying Li, Xun-Hua Liu, Hong-Mei Sui, Yong-Xia Liu, Zheng-Quan Xiao, Ping Zheng, Lin Chen, Su Yao, Cheng Xing and 2 more

Abstract read
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In one paragraph

Article in Medical oncology (Northwood, London, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Expression ofFrontiers in oncology · 2023
    Article
  2. Methylation Status of theAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2020
    Article
  3. MicroRNA Biogenesis Pathway Genes Are Deregulated in Colorectal Cancer.International journal of molecular sciences · 2019
    Article
  4. Review
  5. Article
  6. Article
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  8. Article
  9. Article
  10. Review
  11. Review
  12. Lin28B is a novel prognostic marker in gastric adenocarcinoma.International journal of clinical and experimental pathology · 2014
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Yu-Hong LiuDepartment of Pathology, Baoan Hospital, Southern Medical University, Shenzhen 518101, People's Republic of China. pathologylee@126.com
Ying Li
Xun-Hua Liu
Hong-Mei Sui
Yong-Xia Liu
Zheng-Quan Xiao
Ping Zheng
Lin Chen
Su Yao
Cheng Xing
Jun Zhou
Jian-Ming Li
Southern Medical University · CNSouthern Medical University Shenzhen Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genes associated with induced pluripotent stem cells (iPS genes) are several pivotal transcriptional factors, which are used to induce pluripotent stem cells from some adult somatic cells. The roles of these iPS genes and especially the signature for these iPS genes in colorectal cancer (CRC) are still unclear. Overexpressed Oct4 and Lin28 but down-regulated Nanog were found in tumor tissues compared with that in their paired normal counterparts of CRC patients. Interestingly, we found that Oct4, Lin28 and Nanog were highly overexpressed in some patients. And the signature for iPS genes was correlated with tumor site (P = 0.012), lymph node status (P = 0.033), Dukes classification (P = 0.033) of CRC patients. Moreover, an independent public expression profiling data showed signature for the four iPS genes could successfully be used to predict the survival of CRC patients with Dukes stages B and C. Immunofluorescent staining of fresh CRC tissues from patients showed that strong co-expressions of Oct4 and Nanog proteins or Sox2 and Lin28 were present in some CRC cells. Then, CRC cell subclone with four iPS genes overexpression were establish by a mixed retroviral system. We found that iPS genes promote sphere-formation, proliferation, colony formation, migration of human CRC cells in vitro and tumor growth in vivo. Our study first shows the clinical significance of iPS signature in CRC patients.

Indexed as

TranscriptomeBlotting, WesternColorectal NeoplasmsDisease-Free SurvivalFemaleFluorescent Antibody TechniqueHomeodomain ProteinsHumansImmunohistochemistryMaleMiddle AgedNanog Homeobox ProteinNeoplasm StagingOctamer Transcription Factor-3Pluripotent Stem CellsReverse Transcriptase Polymerase Chain ReactionHomeodomain ProteinsLin28A protein, humanNanog Homeobox ProteinNANOG protein, humanOctamer Transcription Factor-3POU5F1 protein, humanRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID23307247
OpenAlexW2058106671

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.