Evidence map›Paper›PMID 23304423›Full record

ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium2012

A study of actions in operative notes.

Yan Wang, Serguei Pakhomov, Nora E Burkart, James O Ryan, Genevieve B Melton

Abstract read
In one paragraph

Article in AMIA ... Annual Symposium proceedings. AMIA Symposium, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Domain adaptation for semantic role labeling of clinical text.Journal of the American Medical Informatics Association : JAMIA · 2015
    Article
  5. Domain adaption of parsing for operative notes.Journal of biomedical informatics · 2015
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yan WangInstitute for Health Informatics, University of Minnesota, Minneapolis, MN, USA.
Serguei Pakhomov
Nora E Burkart
James O Ryan
Genevieve B Melton

Funding

Sematic Relatedness for Active Medication Safety and Outcomes SurveillanceR01LM009623 · NLM · UNIVERSITY OF MINNESOTA · PI PAKHOMOV, SERGUEI VS · 2008 to 2010
$949k
NLM NIH HHS R01 LM009623NLM NIH HHS R01 LM009623-01
6 · The paper itself

Abstract

Operative notes contain rich information about techniques, instruments, and materials used in procedures. To assist development of effective information extraction (IE) techniques for operative notes, we investigated the sublanguage used to describe actions within the operative report 'procedure description' section. Deep parsing results of 362,310 operative notes with an expanded Stanford parser using the SPECIALIST Lexicon resulted in 200 verbs (92% coverage) including 147 action verbs. Nominal action predicates for each action verb were gathered from WordNet, SPECIALIST Lexicon, New Oxford American Dictionary and Stedman's Medical Dictionary. Coverage gaps were seen in existing lexical, domain, and semantic resources (Unified Medical Language System (UMLS) Metathesaurus, SPECIALIST Lexicon, WordNet and FrameNet). Our findings demonstrate the need to construct surgical domain-specific semantic resources for IE from operative notes.

Indexed as

Medical RecordsNatural Language ProcessingSurgical Procedures, OperativeVocabulary, ControlledHumansInformation Storage and RetrievalOperating Room Information Systems

Identifiers

PMID23304423
PMCPMC3540433

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.