Evidence map›Paper›PMID 23303704›Full record

ArticleCytometry. Part A : the journal of the International Society for Analytical Cytology2013

High-throughput flow cytometry compatible biosensor based on fluorogen activating protein technology.

Yang Wu, Phillip H Tapia, Gregory W Fisher, Alan S Waggoner, Jonathan Jarvik, Larry A Sklar

Abstract read
In one paragraph

Article in Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Fluorogenic Labeling Strategies for Biological Imaging.International journal of molecular sciences · 2017
    Review
  5. Article
  6. Dark dyes-bright complexes: fluorogenic protein labeling.Current opinion in chemical biology · 2015
    Review
  7. "Turn-on" protein fluorescence: in situ formation of cyanine dyes.Journal of the American Chemical Society · 2015
    Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yang WuUNM Center for Molecular Discovery, University of New Mexico School of Medicine, Albuquerque, New Mexico 87131, USA. yawu@salud.unm.edu
Phillip H Tapia
Gregory W Fisher
Alan S Waggoner
Jonathan Jarvik
Larry A Sklar

Funding

FLUORESCENT PROBES &IMAGING FOR NETWORKS &PATHWAY(RMI)U54RR022241 · NCRR · MELLON PITTS CORPORATION (MPC CORP) · PI WAGGONER, ALAN S. · 2005 to 2011
$19.9M
Yeast Biology ConsortiumU54MH084690 · NIMH · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI SKLAR, LARRY A. · 2008 to 2013
$14.4M
Fluorescent Biosensors for Networks and PathwaysU54GM103529 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI WAGGONER, ALAN S. · 2012 to 2013
$6.3M
NCRR NIH HHS 5U54RR022241NCRR NIH HHS U54 RR022241NIGMS NIH HHS U54 GM103529NIMH NIH HHS 1U54MH084690-02NIMH NIH HHS 5U54MH084690-03 CDP2NIMH NIH HHS U54 MH084690
6 · The paper itself

Abstract

Monitoring the trafficking of multiple proteins simultaneously in live cells is of great interest because many receptor proteins are found to function together with others in the same cell. However, existing fluorescent labeling techniques have restricted the mechanistic study of functional receptor pairs. We have expanded a hybrid system combining fluorogen-activating protein (FAP) technology and high-throughput flow cytometry to a new type of biosensor that is robust, sensitive, and versatile. This provides the opportunity to study multiple trafficking proteins in the same cell. Human beta2 adrenergic receptor (β2AR) fused with FAP AM2.2 and murine C-C chemokines receptor type 5 fused with FAP MG13 was chosen for our model system. The function of the receptor and the binding between MG13 and fluorogen MG-2p have been characterized by flow cytometry and confocal microscopy assays. The binding of fluorogen and the FAP pair is highly specific, while both FAP-tagged fusion proteins function similarly to their wild-type counterparts. The system has successfully served as a counter screen assay to eliminate false positive compounds identified in a screen against NIH Molecular Libraries Small Molecule Repository targeting regulators of the human β2AR.

Indexed as

High-Throughput Screening AssaysAdrenergic beta-2 Receptor AgonistsBiosensing TechniquesChemokine CCL5Dose-Response Relationship, DrugFlow CytometryFluorescent DyesHumansInhibitory Concentration 50IsoproterenolProtein BindingReceptors, Adrenergic, beta-2Receptors, CCR5Recombinant Fusion ProteinsRosaniline DyesU937 CellsAdrenergic beta-2 Receptor AgonistsChemokine CCL5Fluorescent DyesIsoproterenolmalachite greenReceptors, Adrenergic, beta-2Receptors, CCR5Recombinant Fusion ProteinsRosaniline Dyes

Identifiers

PMID23303704
PMCPMC3621705

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.