Evidence map›Paper›PMID 23302696›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Structure and inhibition of the drug-resistant S31N mutant of the M2 ion channel of influenza A virus.

Jun Wang, Yibing Wu, Chunlong Ma, Giacomo Fiorin, Jizhou Wang, Lawrence H Pinto, Robert A Lamb, Michael L Klein, William F Degrado

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers.

0numbers the graph read from it
0cells of the map it votes in
114citing papers in PubMed
17.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

114 citing papers in PubMed, 222 citations in OpenAlex.

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54 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Jun WangDepartment of Pharmaceutical Chemistry, University of California, San Francisco, CA 94158-9001, USA.
Yibing Wu
Chunlong Ma
Giacomo Fiorin
Jizhou Wang
Lawrence H Pinto
Robert A Lamb
Michael L Klein
William F Degrado
University of California, San Francisco · USTemple University · USInstitute of Neurobiology · BGNorthwestern University · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
Development of drugs that target the M2 proton channel from the influenza A VirusU01AI074571 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI DEGRADO, WILLIAM · 2008 to 2012
$7.5M
Structure of M2 Proton Channel from Influenza A VirusR01GM056423 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI DEGRADO, WILLIAM · 1997 to 2016
$4.5M
The Structure and Function of the Influenza Virus GenomeR01AI020201 · NIAID · NORTHWESTERN UNIVERSITY · PI LAMB, ROBERT A · 1985 to 2016
$2.8M
Howard Hughes Medical InstituteNCI NIH HHS P30 CA060553NIAID NIH HHS R01 AI020201NIAID NIH HHS U01 AI074571NIGMS NIH HHS R01 GM056423
6 · The paper itself

Abstract

The influenza A virus M2 proton channel (A/M2) is the target of the antiviral drugs amantadine and rimantadine, whose use has been discontinued due to widespread drug resistance. Among the handful of drug-resistant mutants, S31N is found in more than 95% of the currently circulating viruses and shows greatly decreased inhibition by amantadine. The discovery of inhibitors of S31N has been hampered by the limited size, polarity, and dynamic nature of its amantadine-binding site. Nevertheless, we have discovered small-molecule drugs that inhibit S31N with potencies greater than amantadine's potency against WT M2. Drug binding locks the protein into a well-defined conformation, and the NMR structure of the complex shows the drug bound in the homotetrameric channel, threaded between the side chains of Asn31. Unrestrained molecular dynamics simulations predicted the same binding site. This S31N inhibitor, like other potent M2 inhibitors, contains a charged ammonium group. The ammonium binds as a hydrate to one of three sites aligned along the central cavity that appear to be hotspots for inhibition. These sites might stabilize hydronium-like species formed as protons diffuse through the outer channel to the proton-shuttling residue His37 near the cytoplasmic end of the channel.

Indexed as

Genes, FungalMutationAmantadineAntiviral AgentsBinding SitesDrug DesignDrug Resistance, ViralHumansInfluenza A virusModels, MolecularNuclear Magnetic Resonance, BiomolecularRecombinant ProteinsStructure-Activity RelationshipViral Matrix ProteinsViroporin ProteinsAmantadineAntiviral AgentsM2 protein, Influenza A virusRecombinant ProteinsViral Matrix ProteinsViroporin Proteins

Identifiers

PMID23302696
PMCPMC3557100
OpenAlexW2033677091

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.