Evidence map›Paper›PMID 23301218›Full record

ReviewAnnals of laboratory medicine2013

Rapid clinical bacteriology and its future impact.

Alex van Belkum, Géraldine Durand, Michel Peyret, Sonia Chatellier, Gilles Zambardi, Jacques Schrenzel, Dee Shortridge, Anette Engelhardt, William Michael Dunne

Abstract readReview
In one paragraph

Review in Annals of laboratory medicine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  16. Genotypic Characteristics and Correlation of Epidemiology ofAntibiotics (Basel, Switzerland) · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Alex van BelkumBioMérieux SA, Unit Microbiology, R&D Microbiology, La Balme Les Grottes, France.
Géraldine Durand
Michel Peyret
Sonia Chatellier
Gilles Zambardi
Jacques Schrenzel
Dee Shortridge
Anette Engelhardt
William Michael Dunne

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clinical microbiology has always been a slowly evolving and conservative science. The sub-field of bacteriology has been and still is dominated for over a century by culture-based technologies. The integration of serological and molecular methodologies during the seventies and eighties of the previous century took place relatively slowly and in a cumbersome fashion. When nucleic acid amplification technologies became available in the early nineties, the predicted "revolution" was again slow but in the end a real paradigm shift did take place. Several of the culture-based technologies were successfully replaced by tests aimed at nucleic acid detection. More recently a second revolution occurred. Mass spectrometry was introduced and broadly accepted as a new diagnostic gold standard for microbial species identification. Apparently, the diagnostic landscape is changing, albeit slowly, and the combination of newly identified infectious etiologies and the availability of innovative technologies has now opened new avenues for modernizing clinical microbiology. However, the improvement of microbial antibiotic susceptibility testing is still lagging behind. In this review we aim to sketch the most recent developments in laboratory-based clinical bacteriology and to provide an overview of emerging novel diagnostic approaches.

Indexed as

BacteriaBacterial InfectionsElectronic NoseHigh-Throughput Nucleotide SequencingHumansMass SpectrometryMolecular Diagnostic TechniquesNucleic Acid Amplification TechniquesAntibiogramAntibioticsAntimicrobial susceptibility testing (AST)DNA testingDrug resistanceInnovationLaboratory automationMALDI-TOF MS

Identifiers

PMID23301218
PMCPMC3535192

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.