Evidence map›Paper›PMID 23301072›Full record

ArticlePloS one2013

Microevolution of the chromosomal region of acute disease antigen A (adaA) in the query (Q) fever agent Coxiella burnetii.

Dimitrios Frangoulidis, Wolf D Splettstoesser, Olfert Landt, Jasmin Dehnhardt, Klaus Henning, Angela Hilbert, Tilman Bauer, Markus Antwerpen, Hermann Meyer, Mathias C Walter and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Characterization ofMicroorganisms · 2022
    Article
  4. Article
  5. High Prevalence and New Genotype ofPathogens (Basel, Switzerland) · 2021
    Article
  6. Investigating the Role of Micromammals in the Ecology ofAnimals : an open access journal from MDPI · 2021
    Article
  7. Article
  8. First isolation of Coxiella burnetii from clinical material by cell-free medium (ACCM2).European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2015
    Article
  9. Article
  10. Genome sequence of Coxiella burnetii strain Namibia.Standards in genomic sciences · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 1 country.

Dimitrios FrangoulidisBundeswehr Institute of Microbiology, Munich, Germany. DimitriosFrangoulidis@Bundeswehr.org
Wolf D Splettstoesser
Olfert Landt
Jasmin Dehnhardt
Klaus Henning
Angela Hilbert
Tilman Bauer
Markus Antwerpen
Hermann Meyer
Mathias C Walter
Johannes K-M Knobloch
Friedrich-Loeffler-Institut · DEInstitut für Mikrobiologie der BundeswehrTIB Molbiol (Germany) · DEBundeswehr Medical Service Academy · DEInstitute of Bioinformatics and Systems Biology · DEUniversität der Bundeswehr München · DEUniversity of Lübeck · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The acute disease antigen A (adaA) gene is believed to be associated with Coxiella burnetii strains causing acute Q fever. The detailed analysis of the adaA genomic region of 23 human- and 86 animal-derived C. burnetii isolates presented in this study reveals a much more polymorphic appearance and distribution of the adaA gene, resulting in a classification of C. burnetii strains of better differentiation than previously anticipated. Three different genomic variants of the adaA gene were identified which could be detected in isolates from acute and chronic patients, rendering the association of adaA positive strains with acute Q fever disease disputable. In addition, all adaA positive strains in humans and animals showed the occurrence of the QpH1 plasmid. All adaA positive isolates of acute human patients except one showed a distinct SNP variation at position 431, also predominant in sheep strains, which correlates well with the observation that sheep are a major source of human infection. Furthermore, the phylogenetic analysis of the adaA gene revealed three deletion events and supported the hypothesis that strain Dugway 5J108-111 might be the ancestor of all known C. burnetii strains. Based on our findings, we could confirm the QpDV group and we were able to define a new genotypic cluster. The adaA gene polymorphisms shown here improve molecular typing of Q fever, and give new insights into microevolutionary adaption processes in C. burnetii.

Indexed as

Evolution, MolecularAntigens, BacterialBacterial Outer Membrane ProteinsBacterial ProteinsChromosomes, BacterialCoxiella burnetiiDNA, BacterialDNA PrimersGene DeletionGenetic MarkersGenotypeHumansMolecular TypingPhylogenyPolymorphism, GeneticProportional Hazards Modelsacute disease antigen A, Coxiella burnetiiAntigens, BacterialBacterial Outer Membrane ProteinsBacterial ProteinsDNA, BacterialDNA PrimersGenetic Markers

Identifiers

PMID23301072
PMCPMC3536764
OpenAlexW2065071165

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.