Evidence map›Paper›PMID 23301070›Full record

ArticlePloS one2013

Retrotransposon insertion in the T-cell acute lymphocytic leukemia 1 (Tal1) gene is associated with severe renal disease and patchy alopecia in Hairpatches (Hpt) mice.

Vishnu Hosur, Melissa L Cox, Lisa M Burzenski, Rebecca L Riding, Lynn Alley, Bonnie L Lyons, Anoop Kavirayani, Kimberly A Martin, Gregory A Cox, Kenneth R Johnson and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact, top 90% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Vishnu HosurThe Jackson Laboratory, Bar Harbor, Maine, United States of America.
Melissa L Cox
Lisa M Burzenski
Rebecca L Riding
Lynn Alley
Bonnie L Lyons
Anoop Kavirayani
Kimberly A Martin
Gregory A Cox
Kenneth R Johnson
Leonard D Shultz
Jackson Laboratory · US

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
Genetic Control of Phospholipid Biosynthesis and Muscular DystrophyR01AR054170 · NIAMS · JACKSON LABORATORY · PI COX, GREGORY A. · 2007 to 2016
$4.4M
HUMAN HEMOPOIESIS IN NEW SCID MOUSE MODELSR01DK057199 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI GREINER, DALE LESLIE · 2000 to 2003
$966k
NCI NIH HHS CA034196NCI NIH HHS P30 CA034196NIAMS NIH HHS AR054170NIAMS NIH HHS R01 AR054170NIDDK NIH HHS DK057199PHS HHS HLO77642
6 · The paper itself

Abstract

"Hairpatches" (Hpt) is a naturally occurring, autosomal semi-dominant mouse mutation. Hpt/Hpt homozygotes die in utero, while Hpt/+ heterozygotes exhibit progressive renal failure accompanied by patchy alopecia. This mutation is a model for the rare human disorder "glomerulonephritis with sparse hair and telangiectases" (OMIM 137940). Fine mapping localized the Hpt locus to a 6.7 Mb region of Chromosome 4 containing 62 known genes. Quantitative real time PCR revealed differential expression for only one gene in the interval, T-cell acute lymphocytic leukemia 1 (Tal1), which was highly upregulated in the kidney and skin of Hpt/+ mice. Southern blot analysis of Hpt mutant DNA indicated a new EcoRI site in the Tal1 gene. High throughput sequencing identified an endogenous retroviral class II intracisternal A particle insertion in Tal1 intron 4. Our data suggests that the IAP insertion in Tal1 underlies the histopathological changes in the kidney by three weeks of age, and that glomerulosclerosis is a consequence of an initial developmental defect, progressing in severity over time. The Hairpatches mouse model allows an investigation into the effects of Tal1, a transcription factor characterized by complex regulation patterns, and its effects on renal disease.

Indexed as

MutationAlopeciaAnimalsBasic Helix-Loop-Helix ProteinsChromosome MappingCrosses, GeneticDisease Models, AnimalDNA Transposable ElementsFemaleGene Expression RegulationGenetic LinkageKidney DiseasesMiceProto-Oncogene ProteinsReal-Time Polymerase Chain ReactionT-Cell Acute Lymphocytic Leukemia Protein 1Basic Helix-Loop-Helix ProteinsDNA Transposable ElementsProto-Oncogene ProteinsTal1 protein, mouseT-Cell Acute Lymphocytic Leukemia Protein 1Transcription Factors

Identifiers

PMID23301070
PMCPMC3534690
OpenAlexW2090803028

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.