Evidence map›Paper›PMID 23301041›Full record

ArticlePloS one2013

A proteomic approach provides new insights into the control of soil-borne plant pathogens by Bacillus species.

Omür Baysal, Duo Lai, Han-Hong Xu, Mirko Siragusa, Mikail Calışkan, Francesco Carimi, Jaime A Teixeira da Silva, Mahmut Tör

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 111 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Isolation and Identification ofPlants (Basel, Switzerland) · 2023
    Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Comparison of Antifungal Activity ofPlants (Basel, Switzerland) · 2022
    Article
  14. Article
  15. Review
  16. Biological Control ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 4 countries.

Omür BaysalDepartment of Molecular Biology and Genetic, Faculty of Life Sciences, Muğla Sıtkı Koçman University, Muğla, Turkey. omurbaysal@mu.edu.tr
Duo Lai
Han-Hong Xu
Mirko Siragusa
Mikail Calışkan
Francesco Carimi
Jaime A Teixeira da Silva
Mahmut Tör
Kagawa University · JPMinistry of Food Agriculture and Livestock · TRMuğla University · TRSouth China Agricultural University · CNState Key Laboratory For Conservation and Utilization of Subtropical Agro-BioresourcesUniversity of Worcester · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Beneficial microorganisms (also known as biopesticides) are considered to be one of the most promising methods for more rational and safe crop management practices. We used Bacillus strains EU07, QST713 and FZB24, and investigated their inhibitory effect on Fusarium. Bacterial cell cultures, cell-free supernatants and volatiles displayed varying degrees of suppressive effect. Proteomic analysis of secreted proteins from EU07 and FZB24 revealed the presence of lytic enzymes, cellulases, proteases, 1,4-β-glucanase and hydrolases, all of which contribute to degradation of the pathogen cell wall. Further proteomic investigations showed that proteins involved in metabolism, protein folding, protein degradation, translation, recognition and signal transduction cascade play an important role in the control of Fusarium oxysporum. Our findings provide new knowledge on the mechanism of action of Bacillus species and insight into biocontrol mechanisms.

Indexed as

Soil MicrobiologyBacillusBiological AssayBiological Control AgentsFusariumGenetic VariationGenotypePlant DiseasesProtein FoldingProteomicsSpecies SpecificityBiological Control Agents

Identifiers

PMID23301041
PMCPMC3536778
OpenAlexW2082075494

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.