Evidence map›Paper›PMID 23300459›Full record

ArticlePLoS pathogens2013

IRF-3, IRF-5, and IRF-7 coordinately regulate the type I IFN response in myeloid dendritic cells downstream of MAVS signaling.

Helen M Lazear, Alissa Lancaster, Courtney Wilkins, Mehul S Suthar, Albert Huang, Sarah C Vick, Lisa Clepper, Larissa Thackray, Margaret M Brassil, Herbert W Virgin and 5 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 195 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
195citing papers in PubMed, 2 pooled it
15.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

195 citing papers in PubMed, 2 syntheses or guidelines pooled it, 293 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Genes · 2021
    Trial
  4. Article
  5. International journal of biological sciences · 2026
    Article
  6. Article
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  9. Review
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  18. Article
  19. Transcriptional signature of CD56Frontiers in immunology · 2024
    Article
  20. Article

135 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Helen M LazearDepartment of Medicine, Washington University School of Medicine, St. Louis, MO, USA.
Alissa Lancaster
Courtney Wilkins
Mehul S Suthar
Albert Huang
Sarah C Vick
Lisa Clepper
Larissa Thackray
Margaret M Brassil
Herbert W Virgin
Janko Nikolich-Zugich
Ashlee V Moses
Michael Gale
Klaus Früh
Michael S Diamond
University of Washington · USWashington University in St. Louis · USOregon Health & Science University · USUniversity of Arizona · US

Funding

Virology and Smallpox VaccinationsU54AI057160 · NIAID · WASHINGTON UNIVERSITY · PI RAY, RANJIT · 2003 to 2013
$80.9M
The Burden of Chikungunya and Dengue Infection in KenyaU54AI081680 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI RYMAN, KATHERINE D · 2009 to 2013
$40.4M
West Nile Virus and host control of innate defensesU19AI083019 · NIAID · UNIVERSITY OF WASHINGTON · PI GALE, MICHAEL · 2009 to 2018
$22.5M
Immune Function and Biodefense in Immunocrompromised PopulationsN01AI50027 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI NIKOLICH, JANKO Z. · 2007 to 2010
$6.9M
Cell-Specific Programs of Host Defense Against West Nile VirusR01AI074973 · NIAID · UNIVERSITY OF WASHINGTON · PI GALE, MICHAEL · 2009 to 2010
$774k
IMMUNE FUNCTION AND BIODEFENSE IN CHILDREN.ELDERLY AND IMMUNOCOMPROMIS-266050027N01AI050027 · NIAID · OREGON HEALTH SCIENCE UNIVER · PI NIKOLICH-ZUGICH, JANKO · 2006 to 2006
–
NIAID NIH HHS N01 AI050027NIAID NIH HHS N01 AI50027NIAID NIH HHS R01 AI074973NIAID NIH HHS U19 AI083019NIAID NIH HHS U54 AI057160NIAID NIH HHS U54 AI081680
6 · The paper itself

Abstract

Although the transcription factors IRF-3 and IRF-7 are considered master regulators of type I interferon (IFN) induction and IFN stimulated gene (ISG) expression, Irf3(-/-)×Irf7(-/-) double knockout (DKO) myeloid dendritic cells (mDC) produce relatively normal levels of IFN-β after viral infection. We generated Irf3(-/-)×Irf5(-/-)×Irf7(-/-) triple knockout (TKO) mice to test whether IRF-5 was the source of the residual induction of IFN-β and ISGs in mDCs. In pathogenesis studies with two unrelated positive-sense RNA viruses (West Nile virus (WNV) and murine norovirus), TKO mice succumbed at rates greater than DKO mice and equal to or approaching those of mice lacking the type I IFN receptor (Ifnar(-/-)). In ex vivo studies, after WNV infection or exposure to Toll-like receptor agonists, TKO mDCs failed to produce IFN-β or express ISGs. In contrast, this response was sustained in TKO macrophages following WNV infection. To define IRF-regulated gene signatures, we performed microarray analysis on WNV-infected mDC from wild type (WT), DKO, TKO, or Ifnar(-/-) mice, as well as from mice lacking the RIG-I like receptor adaptor protein MAVS. Whereas the gene induction pattern in DKO mDC was similar to WT cells, remarkably, almost no ISG induction was detected in TKO or Mavs(-/-) mDC. The relative equivalence of TKO and Mavs(-/-) responses suggested that MAVS dominantly regulates ISG induction in mDC. Moreover, we showed that MAVS-dependent induction of ISGs can occur through an IRF-5-dependent yet IRF-3 and IRF-7-independent pathway. Our results establish IRF-3, -5, and -7 as the key transcription factors responsible for mediating the type I IFN and ISG response in mDC during WNV infection and suggest a novel signaling link between MAVS and IRF-5.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsDendritic CellsInterferon-betaInterferon Regulatory Factor-3Interferon Regulatory Factor-7Interferon Regulatory FactorsMacrophagesMiceMice, Inbred C57BLMice, KnockoutMyeloid CellsReceptor, Interferon alpha-betaSignal TransductionToll-Like ReceptorsViral LoadAdaptor Proteins, Signal TransducingInterferon-betaInterferon Regulatory Factor-3Interferon Regulatory Factor-7Interferon Regulatory FactorsIrf5 protein, mouseMAVS protein, mouseReceptor, Interferon alpha-betaToll-Like Receptors

Identifiers

PMID23300459
PMCPMC3536698
OpenAlexW2036679352

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.