Evidence map›Paper›PMID 23300384›Full record

ArticlePLoS biology2013

The circadian clock coordinates ribosome biogenesis.

Céline Jouffe, Gaspard Cretenet, Laura Symul, Eva Martin, Florian Atger, Felix Naef, Frédéric Gachon

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 181 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
181citing papers in PubMed, 1 pooled it
12.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

181 citing papers in PubMed, 1 synthesis or guideline pooled it, 295 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Rhythmic Dynamics of Stress Granules inInternational journal of molecular sciences · 2025
    Article
  16. Article
  17. Article
  18. Article
  19. Circadian Control of Protein Synthesis.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  20. Review

121 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Céline JouffeDepartment of Pharmacology and Toxicology, University of Lausanne, Lausanne, Switzerland.
Gaspard Cretenet
Laura Symul
Eva Martin
Florian Atger
Felix Naef
Frédéric Gachon
University of Lausanne · CHÉcole Polytechnique Fédérale de Lausanne · CH

Funding

European Research Council 260988
6 · The paper itself

Abstract

Biological rhythms play a fundamental role in the physiology and behavior of most living organisms. Rhythmic circadian expression of clock-controlled genes is orchestrated by a molecular clock that relies on interconnected negative feedback loops of transcription regulators. Here we show that the circadian clock exerts its function also through the regulation of mRNA translation. Namely, the circadian clock influences the temporal translation of a subset of mRNAs involved in ribosome biogenesis by controlling the transcription of translation initiation factors as well as the clock-dependent rhythmic activation of signaling pathways involved in their regulation. Moreover, the circadian oscillator directly regulates the transcription of ribosomal protein mRNAs and ribosomal RNAs. Thus the circadian clock exerts a major role in coordinating transcription and translation steps underlying ribosome biogenesis.

Indexed as

AnimalsARNTL Transcription FactorsCircadian ClocksCircadian RhythmCryptochromesEnzyme ActivationEukaryotic Initiation FactorsExtracellular Signal-Regulated MAP KinasesGene Expression RegulationMechanistic Target of Rapamycin Complex 1MiceMice, Inbred C57BLMice, KnockoutMultiprotein ComplexesPol1 Transcription Initiation Complex ProteinsProtein BiosynthesisARNTL Transcription FactorsBmal1 protein, mouseCry1 protein, mouseCry2 protein, mouseCryptochromesEukaryotic Initiation FactorsExtracellular Signal-Regulated MAP KinasesMechanistic Target of Rapamycin Complex 1Multiprotein ComplexesPol1 Transcription Initiation Complex ProteinsProto-Oncogene Proteins c-aktRNA, MessengerRNA, RibosomalTOR Serine-Threonine Kinasestranscription factor UBF

Identifiers

PMID23300384
PMCPMC3536797
OpenAlexW2000487298

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.