Evidence map›Paper›PMID 23299887›Full record

ArticleNature communications2013

Extensive diversification of IgH subclass-encoding genes and IgM subclass switching in crocodilians.

Gang Cheng, Yang Gao, Tao Wang, Yi Sun, Zhiguo Wei, Lingxiao Li, Liming Ren, Ying Guo, Xiaoxiang Hu, Yan Lu and 9 more

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Nature communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Deimination Protein Profiles inFrontiers in immunology · 2020
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Defense genes missing from the flight division.Developmental and comparative immunology · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 3 countries.

Gang ChengState Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing 100193, China.
Yang Gao
Tao Wang
Yi Sun
Zhiguo Wei
Lingxiao Li
Liming Ren
Ying Guo
Xiaoxiang Hu
Yan Lu
Xumin Wang
Guiming Liu
Chenglin Zhang
Jun Yu
Qiang Pan-Hammarström
Lennart Hammarström
Xiaobing Wu
Ning Li
Yaofeng Zhao
China Agricultural University · CNUniversity of Minnesota · USChinese Academy of Sciences · CNKarolinska University Hospital · SEAnhui Normal University · CNBeijing Institute of Genomics · CNHenan University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Crocodilians are a group of reptiles that are closely related to birds and are thought to possess a strong immune system. Here we report that the IgH locus in the Siamese crocodile and the Chinese alligator contains multiple μ genes, in contrast to other tetrapods. Both the μ2 and μ3 genes are expressed through class-switch recombination involving the switch region and germline transcription. Both IgM1 and IgM2 are present in the serum as polymers, which implies that IgM class switching may have significant roles in humoural immunity. The crocodilian α genes are the first IgA-encoding genes identified in reptiles, and these genes show an inverted transcriptional orientation similar to that of birds. The identification of both α and δ genes in crocodilians suggests that the IgH loci of modern living mammals, reptiles and birds share a common ancestral organization.

Indexed as

Genetic VariationAlligators and CrocodilesAnimalsBase SequenceExonsGene AmplificationGene Expression ProfilingGene Expression RegulationGene LibraryGenetic LociGenomeGerm CellsImmunoglobulin Class SwitchingImmunoglobulin Heavy ChainsImmunoglobulin MIntronsImmunoglobulin Heavy ChainsImmunoglobulin MRNA, Messenger

Identifiers

PMID23299887
OpenAlexW2073746019

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.