Evidence map›Paper›PMID 23298157›Full record

ArticleBiochemistry2013

Roles of the A and C sites in the manganese-specific activation of MntR.

Amanda M McGuire, Bonnie J Cuthbert, Zhen Ma, Kristen D Grauer-Gray, Megan Brunjes Brophy, Kayce A Spear, Sumarin Soonsanga, Joseph I Kliegman, Sarah L Griner, John D Helmann and 1 more

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 42 citations in OpenAlex.

  1. Microbial metal physiology: ions to ecosystems.Nature reviews. Microbiology · 2025
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Structural Dynamics of theInternational journal of molecular sciences · 2023
    Article
  9. Why is manganese so valuable to bacterial pathogens?Frontiers in cellular and infection microbiology · 2023
    Review
  10. Iron homeostasis inMicrobiology (Reading, England) · 2023
    Article
  11. A genetically encoded fluorescent sensor for manganese(II), engineered from lanmodulin.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Review
  13. Metalation: nature's challenge in bioinorganic chemistry.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2020
    Review
  14. Article
  15. Review
  16. Article
  17. Redox Sensing by FeAntioxidants & redox signaling · 2018
    Review
  18. Article
  19. Metal homeostasis and resistance in bacteria.Nature reviews. Microbiology · 2017
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Amanda M McGuireDepartment of Chemistry, Reed College, Portland, OR 97202, USA.
Bonnie J Cuthbert
Zhen Ma
Kristen D Grauer-Gray
Megan Brunjes Brophy
Kayce A Spear
Sumarin Soonsanga
Joseph I Kliegman
Sarah L Griner
John D Helmann
Arthur Glasfeld
Reed College · USCornell University · US

Funding

Zinc Homeostasis in Bacillus subtilisR01GM059323 · NIGMS · CORNELL UNIVERSITY ITHACA · PI HELMANN, JOHN D · 2000 to 2017
$4.5M
Studies of Manganese Binding Regulatory ProteinsR15GM069644 · NIGMS · REED COLLEGE · PI GLASFELD, ARTHUR · 2004 to 2007
$384k
NIGMS NIH HHS GM059323NIGMS NIH HHS R01 GM059323NIGMS NIH HHS R15 GM069644NIGMS NIH HHS R15 GM0699644
6 · The paper itself

Abstract

The manganese transport regulator (MntR) represses the expression of genes involved in manganese uptake in Bacillus subtilis. It selectively responds to Mn(2+) and Cd(2+) over other divalent metal cations, including Fe(2+), Co(2+), and Zn(2+). Previous work has shown that MntR forms binuclear complexes with Mn(2+) or Cd(2+) at two binding sites, labeled A and C, that are separated by 4.4 Å. Zinc activates MntR poorly and binds only to the A site, forming a mononuclear complex. The difference in metal binding stoichiometry suggested a mechanism for selectivity in MntR. Larger metal cations are strongly activating because they can form the binuclear complex, while smaller metal ions cannot bind with the geometry needed to fully occupy both metal binding sites. To investigate this hypothesis, structures of MntR in complex with two other noncognate metal ions, Fe(2+) and Co(2+), have been determined. Each metal forms a mononuclear complex with MntR with the metal ion bound in the A site, supporting the conclusions drawn from the Zn(2+) complex. Additionally, we investigated two site-specific mutants of MntR, E11K and H77A, that contain substitutions of metal binding residues in the A site. While metal binding in each mutant is significantly altered relative to that of wild-type MntR, both mutants retain activity and selectivity for Mn(2+) in vitro and in vivo. That observation, coupled with previous studies, suggests that the A and C sites both contribute to the selectivity of MntR.

Indexed as

Bacillus subtilisAmino Acid MotifsAmino Acid SubstitutionBacterial ProteinsBinding SitesCalorimetryCobaltCoordination ComplexesCrystallography, X-RayHydrogen BondingIronManganeseModels, MolecularMutagenesis, Site-DirectedProtein BindingRepressor ProteinsBacterial ProteinsCobaltCoordination ComplexesIronManganeseMntR protein, bacteriaRepressor Proteins

Identifiers

PMID23298157
PMCPMC3562352
OpenAlexW2081993555

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.