Evidence map›Paper›PMID 23298145›Full record

ArticleAnnals of clinical microbiology and antimicrobials2013

Primary antibiotic resistance and associated mechanisms in Helicobacter pylori isolates from Senegalese patients.

Abdoulaye Seck, Christophe Burucoa, Daouda Dia, Mouhamadou Mbengue, Manuella Onambele, Josette Raymond, Sebastien Breurec

Open access · goldAbstract read
In one paragraph

Article in Annals of clinical microbiology and antimicrobials, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 4 pooled it
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 4 syntheses or guidelines pooled it, 64 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Molecular tools of antibiotic resistance forFrontiers in gastroenterology (Lausanne, Switzerland) · 2024
    Review
  6. Current Worldwide Trends in PediatricChildren (Basel, Switzerland) · 2023
    Review
  7. Molecular characterization ofSaudi medical journal · 2022
    Article
  8. The Challenges of Eradicating PediatricChildren (Basel, Switzerland) · 2022
    Review
  9. Article
  10. Primary Resistance Pattern ofInfection and drug resistance · 2020
    Review
  11. Infections withWorld journal of gastroenterology · 2019
    Review
  12. Point Mutations atThe American journal of tropical medicine and hygiene · 2018
    Article
  13. Molecular Patterns of Resistance AmongFrontiers in microbiology · 2018
    Article
  14. Helicobacter pylori treatment: antibiotics or probiotics.Applied microbiology and biotechnology · 2018
    Review
  15. Review
  16. Article
  17. Antibiotic treatment for Helicobacter pylori: Is the end coming?World journal of gastrointestinal pharmacology and therapeutics · 2015
    Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Abdoulaye SeckInstitut Pasteur, Unité de Biologie Médicale et Environnementale, 36 avenue pasteur, Dakar, Senegal.
Christophe Burucoa
Daouda Dia
Mouhamadou Mbengue
Manuella Onambele
Josette Raymond
Sebastien Breurec
Institut Pasteur de Dakar · SNHôpital Aristide Le Dantec · SNInstitut Pasteur · FRUniversité de Poitiers · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAntibiotic combination therapy for Helicobacter pylori eradication must be adapted to local resistance patterns, but the epidemiology of H. pylori resistance to antibiotics is poorly documented in Africa. The aim was to determine the antibiotic resistance rates, as well as the associated molecular mechanisms, of strains isolated in Dakar, Senegal.

methodsOne hundred and eight H. pylori strains were isolated between 2007 and 2009 from 108 patients presenting with upper abdominal pain to the Gastroenterology Department of Le Dantec Hospital. Antimicrobial susceptibility testing was performed for amoxicillin, clarithromycin, metronidazole, levofloxacin and tetracyclin using the E-test method. Mutations in the 23S rRNA gene of clarithromycin-resistant strains and in gyrA and gyrB of levofloxacin-resistant strains were investigated.

resultsIsolates were characterized by no resistance to amoxicillin (0%), tetracycline (0%), and very low rate of resistance to clarithromycin (1%), but a high rate of resistance to metronidazole (85%). The clarithromycin-resistant strain displayed the A2143G mutation. A worrying rate of levofloxacin resistance was detected (15%). N87I and D91N were the most common mutations in the quinolone-resistance-determining region of gyrA.

conclusionsThe first-line empirical regimen for H. pylori eradication in Senegal should include clarithromycin. Increasing rates of fluoroquinolone resistance detected should discourage the use of levofloxacin-containing regimens without prior antimicrobial susceptibility testing.

Indexed as

Drug Resistance, BacterialAdolescentAdultAgedAged, 80 and overAmoxicillinClarithromycinDNA GyraseFemaleHelicobacter InfectionsHelicobacter pyloriHumansLevofloxacinMaleMetronidazoleMicrobial Sensitivity TestsAmoxicillinClarithromycinDNA GyraseLevofloxacinMetronidazoleOfloxacinRNA, Ribosomal, 23STetracycline

Identifiers

PMID23298145
PMCPMC3552979
OpenAlexW2157095139

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.