Evidence map›Paper›PMID 23297674›Full record

ArticleBMC plant biology2013

Expression-based and co-localization detection of arabinogalactan protein 6 and arabinogalactan protein 11 interactors in Arabidopsis pollen and pollen tubes.

Mário Costa, Margarida Sofia Nobre, Jörg D Becker, Simona Masiero, Maria Isabel Amorim, Luís Gustavo Pereira, Sílvia Coimbra

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 93 citations in OpenAlex.

  1. Review
  2. Article
  3. AtFH5 recruits and transports the arabinogalactan protein AGP23 to maintain the tip growth of pollen tube.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Hydroxyproline-Frontiers in plant science · 2022
    Article
  12. Article
  13. Signaling at Physical Barriers during Pollen-Pistil Interactions.International journal of molecular sciences · 2021
    Review
  14. Article
  15. Spatial and Temporal Distribution of Arabinogalactan Proteins duringInternational journal of molecular sciences · 2021
    Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Glycosylphosphatidylinositol-Anchored Proteins inFrontiers in plant science · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Mário CostaDepartamento de Biologia, Faculdade de Ciências, Universidade do Porto, Edifício FC4 Rua do Campo Alegre, 4169-007, Porto, Portugal.
Margarida Sofia Nobre
Jörg D Becker
Simona Masiero
Maria Isabel Amorim
Luís Gustavo Pereira
Sílvia Coimbra
Universidade do Porto · PTInstituto Gulbenkian de Ciência · PTUniversity of Milan · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundArabinogalactan proteins (AGPs) are cell wall proteoglycans that have been shown to be important for pollen development. An Arabidopsis double null mutant for two pollen-specific AGPs (agp6 agp11) showed reduced pollen tube growth and compromised response to germination cues in vivo. A microarray experiment was performed on agp6 agp11 pollen tubes to search for genetic interactions in the context of pollen tube growth. A yeast two-hybrid experiment for AGP6 and AGP11 was also designed.

resultsThe lack of two specific AGPs induced a meaningful shift in the gene expression profile. In fact, a high number of genes showed altered expression levels, strengthening the case that AGP6 and AGP11 are involved in complex phenomena. The expression levels of calcium- and signaling-related genes were found to be altered, supporting the known roles of the respective proteins in pollen tube growth. Although the precise nature of the proposed interactions needs further investigation, the putative involvement of AGPs in signaling cascades through calmodulin and protein degradation via ubiquitin was indicated. The expression of stress-, as well as signaling- related, genes was also changed; a correlation that may result from the recognized similarities between signaling pathways in both defense and pollen tube growth.The results of yeast two-hybrid experiments lent further support to these signaling pathways and revealed putative AGP6 and AGP11 interactors implicated in recycling of cell membrane components via endocytosis, through clathrin-mediated endosomes and multivesicular bodies.

conclusionsThe data presented suggest the involvement of AGP6 and AGP11 in multiple signaling pathways, in particular those involved in developmental processes such as endocytosis-mediated plasma membrane remodeling during Arabidopsis pollen development. This highlights the importance of endosomal trafficking pathways which are rapidly emerging as fundamental regulators of the wall physiology.

Indexed as

Arabidopsis ProteinsGene Expression Regulation, PlantMucoproteinsPlant ProteinsPollenPollen TubeArabidopsis Proteinsarabinogalactan proteinsMucoproteinsPlant Proteins

Identifiers

PMID23297674
PMCPMC3546934
OpenAlexW1977050350

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.