Evidence map›Paper›PMID 23297413›Full record

ArticleThe Journal of biological chemistry2013

Molecular architecture of a complex between an adhesion protein from the malaria parasite and intracellular adhesion molecule 1.

Alan Brown, Louise Turner, Stig Christoffersen, Katrina A Andrews, Tadge Szestak, Yuguang Zhao, Sine Larsen, Alister G Craig, Matthew K Higgins

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 2 pooled it
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 2 syntheses or guidelines pooled it, 43 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Review
  5. Review
  6. Article
  7. The Potential Roles of Glial Cells in the Neuropathogenesis of Cerebral Malaria.Frontiers in cellular and infection microbiology · 2021
    Review
  8. Review
  9. Review
  10. Structural insights into diverse modes of ICAM-1 binding byProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  11. Article
  12. Towards an anti-disease malaria vaccine.Emerging topics in life sciences · 2017
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Alan BrownDepartment of Biochemistry, University of Cambridge, Cambridge, CB2 1GA, United Kingdom.
Louise Turner
Stig Christoffersen
Katrina A Andrews
Tadge Szestak
Yuguang Zhao
Sine Larsen
Alister G Craig
Matthew K Higgins
University of Copenhagen · DKLiverpool School of Tropical Medicine · GBUniversity of Cambridge · GBUniversity of Oxford · GB

Funding

Wellcome Trust 087692/Z/08/ZWellcome Trust 095507
6 · The paper itself

Abstract

The adhesion of Plasmodium falciparum-infected erythrocytes to human tissues or endothelium is central to the pathology caused by the parasite during malaria. It contributes to the avoidance of parasite clearance by the spleen and to the specific pathologies of cerebral and placental malaria. The PfEMP1 family of adhesive proteins is responsible for this sequestration by mediating interactions with diverse human ligands. In addition, as the primary targets of acquired, protective immunity, the PfEMP1s are potential vaccine candidates. PfEMP1s contain large extracellular ectodomains made from CIDR (cysteine-rich interdomain regions) and DBL (Duffy-binding-like) domains and show extensive variation in sequence, size, and domain organization. Here we use biophysical methods to characterize the entire ∼300-kDa ectodomain from IT4VAR13, a protein that interacts with the host receptor, intercellular adhesion molecule-1 (ICAM-1). We show through small angle x-ray scattering that IT4VAR13 is rigid, elongated, and monomeric. We also show that it interacts with ICAM-1 through the DBLβ domain alone, forming a 1:1 complex. These studies provide a first low resolution structural view of a PfEMP1 ectodomain in complex with its ligand. They show that it combines a modular domain arrangement consisting of individual ligand binding domains, with a defined higher order architecture that exposes the ICAM-1 binding surface to allow adhesion.

Indexed as

AnimalsBinding SitesBiophysicsCell AdhesionCircular DichroismErythrocytesHot TemperatureHumansIntercellular Adhesion Molecule-1KineticsLigandsMalariaPlasmodium falciparumProtein BindingProtein Structure, TertiaryProtozoan ProteinsIntercellular Adhesion Molecule-1LigandsProtozoan Proteins

Identifiers

PMID23297413
PMCPMC3581401
OpenAlexW1974473658

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.