Evidence map›Paper›PMID 23295935›Full record

ArticleAntimicrobial agents and chemotherapy2013

Prevalent polymorphisms in wild-type HIV-1 integrase are unlikely to engender drug resistance to dolutegravir (S/GSK1349572).

Cindy Vavro, Samiul Hasan, Heather Madsen, Joseph Horton, Felix DeAnda, Louise Martin-Carpenter, Akihiko Sato, Robert Cuffe, Shuguang Chen, Mark Underwood and 1 more

Abstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Dolutegravir.Hospital pharmacy · 2014
    Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Cindy VavroGlaxoSmithKline, Research Triangle Park, NC, USA. cindy.l.vavro@gsk.com
Samiul Hasan
Heather Madsen
Joseph Horton
Felix DeAnda
Louise Martin-Carpenter
Akihiko Sato
Robert Cuffe
Shuguang Chen
Mark Underwood
Garrett Nichols

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The majority of HIV-1 integrase amino acid sites are highly conserved, suggesting that most are necessary to carry out the critical structural and functional roles of integrase. We analyzed the 34 most variable sites in integrase (>10% variability) and showed that prevalent polymorphic amino acids at these positions did not affect susceptibility to the integrase inhibitor dolutegravir (S/GSK1349572), as demonstrated both in vitro (in site-directed mutagenesis studies) and in vivo (in a phase IIa study of dolutegravir monotherapy in HIV-infected individuals). Ongoing clinical trials will provide additional data on the virologic activity of dolutegravir across subject viruses with and without prevalent polymorphic substitutions.

Indexed as

Polymorphism, GeneticAmino Acid SequenceConserved SequenceDolutegravirHeterocyclic Compounds, 3-RingHIV-1HIV InfectionsHIV IntegraseHIV Integrase InhibitorsHumansMolecular Sequence DataMutagenesis, Site-DirectedOxazinesPiperazinesPyridonesRandomized Controlled Trials as TopicDolutegravirHeterocyclic Compounds, 3-RingHIV IntegraseHIV Integrase InhibitorsOxazinesp31 integrase protein, Human immunodeficiency virus 1PiperazinesPyridones

Identifiers

PMID23295935
PMCPMC3591886

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.