Evidence map›Paper›PMID 23295226›Full record

ArticleChemico-biological interactions2013

Catalytic contribution of threonine 244 in human ALDH2.

Lilian González-Segura, K-K Ho, Samantha Perez-Miller, Henry Weiner, Thomas D Hurley

Abstract read
In one paragraph

Article in Chemico-biological interactions, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.1field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Lilian González-SeguraDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202-5122, United States.
K-K Ho
Samantha Perez-Miller
Henry Weiner
Thomas D Hurley
Indiana University School of MedicinePurdue University West Lafayette · USIndiana University – Purdue University Indianapolis · US

Funding

RESEARCH TRAINING PROGRAM IN DIABETES AND OBESITYT32DK064466 · NIDDK · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI Carmella Evans-Molina, RONALD C WEK · 2003 to 2026
$5.2M
X RAY STRUCTURE OF HUMAN ALDEHYDE DEHYDROGENASER01AA011982 · NIAAA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI HURLEY, THOMAS D. · 1998 to 2008
$2.0M
Activation and Inhibition of Aldehyde Dehydrogenase 2R01AA018123 · NIAAA · INDIANA UNIVERSITY INDIANAPOLIS · PI HURLEY, THOMAS D. · 2009 to 2013
$2.0M
X8 Prospector for Macromolecular CrystallographyS10RR027281 · NCRR · INDIANA UNIVERSITY INDIANAPOLIS · PI HURLEY, THOMAS D. · 2011 to 2011
$453k
NCRR NIH HHS S10 RR027281NIAAA NIH HHS AA011982NIAAA NIH HHS AA018123NIAAA NIH HHS R01 AA011982NIAAA NIH HHS R01 AA018123NIDDK NIH HHS T32 DK064466NIDDK NIH HHS T32-DK064466
6 · The paper itself

Abstract

Amongst the numerous conserved residues in the aldehyde dehydrogenase superfamily, the precise role of Thr-244 remains enigmatic. Crystal structures show that this residue lies at the interface between the coenzyme-binding and substrate-binding sites with the side chain methyl substituent oriented toward the B-face of the nicotinamide ring of the NAD(P)(+) coenzyme, when in position for hydride transfer. Site-directed mutagenesis in ALDH1A1 and GAPN has suggested a role for Thr-244 in stabilizing the nicotinamide ring for efficient hydride transfer. Additionally, these studies also revealed a negative effect on cofactor binding which is not fully explained by the interaction with the nicotinamide ring. However, it is suggestive that Thr-244 immediately precedes helix αG, which forms one-half of the primary binding interface for the coenzyme. Hence, in order to more fully investigate the role of this highly conserved residue, we generated valine, alanine, glycine and serine substitutions for Thr-244 in human ALDH2. All four substituted enzymes exhibited reduced catalytic efficiency toward substrate and coenzyme. We also determined the crystal structure of the T244A enzyme in the absence and presence of coenzyme. In the apo-enzyme, the alpha G helix, which is key to NAD binding, exhibits increased temperature factors accompanied by a small displacement toward the active site cysteine. This structural perturbation was reversed in the coenzyme-bound complex. Our studies confirm a role for the Thr-244 beta methyl in the accurate positioning of the nicotinamide ring for efficient catalysis. We also identify a new role for Thr-244 in the stabilization of the N-terminal end of helix αG. This suggests that Thr-244, although less critical than Glu-487, is also an important contributor toward coenzyme binding.

Indexed as

Aldehyde DehydrogenaseAldehyde Dehydrogenase, MitochondrialAmino Acid SubstitutionCatalysisCatalytic DomainCoenzymesHumansKineticsNADNiacinamideProtein BindingProtein Structure, SecondaryThreonineAldehyde DehydrogenaseAldehyde Dehydrogenase, MitochondrialALDH2 protein, humanCoenzymesNADNiacinamideThreonine

Identifiers

PMID23295226
PMCPMC3602351
OpenAlexW2081320272

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.