Evidence map›Paper›PMID 23293066›Full record

ArticleInternational journal for numerical methods in biomedical engineering2013

An efficient algorithm for mapping imaging data to 3D unstructured grids in computational biomechanics.

Daniel R Einstein, Andrew P Kuprat, Xiangmin Jiao, James P Carson, David M Einstein, Richard E Jacob, Richard A Corley

Abstract read
In one paragraph

Article in International journal for numerical methods in biomedical engineering, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Daniel R EinsteinSystems Toxicology, Pacific Northwest National Laboratory, Richland, WA, U.S.A. daniel.einstein@pnnl.gov
Andrew P Kuprat
Xiangmin Jiao
James P Carson
David M Einstein
Richard E Jacob
Richard A Corley

Funding

3D IMAGING &COMPUTER MODEL OF THE RESPIRATORY TRACTR01HL073598 · NHLBI · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI CORLEY, RICHARD A · 2004 to 2014
$17.6M
NHLBI NIH HHS R01 HL073598NHLBI NIH HHS R01-HL073598
6 · The paper itself

Abstract

Geometries for organ scale and multiscale simulations of organ function are now routinely derived from imaging data. However, medical images may also contain spatially heterogeneous information other than geometry that are relevant to such simulations either as initial conditions or in the form of model parameters. In this manuscript, we present an algorithm for the efficient and robust mapping of such data to imaging-based unstructured polyhedral grids in parallel. We then illustrate the application of our mapping algorithm to three different mapping problems: (i) the mapping of MRI diffusion tensor data to an unstructured ventricular grid; (ii) the mapping of serial cyrosection histology data to an unstructured mouse brain grid; and (iii) the mapping of computed tomography-derived volumetric strain data to an unstructured multiscale lung grid. Execution times and parallel performance are reported for each case.

Indexed as

AlgorithmsAnimalsBiomechanical PhenomenaBrainBrain MappingDiffusion Magnetic Resonance ImagingImaging, Three-DimensionalMiceRadiography

Identifiers

PMID23293066
PMCPMC6188672

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.