Evidence map›Paper›PMID 23291967›Full record

ArticleInternational immunology2013

Phenotype and function of B cells and dendritic cells from interferon regulatory factor 5-deficient mice with and without a mutation in DOCK2.

Kei Yasuda, Kerstin Nündel, Amanda A Watkins, Tania Dhawan, Ramon G Bonegio, Jessalyn M Ubellacker, Ann Marshak-Rothstein, Ian R Rifkin

Open access · bronzeAbstract read
In one paragraph

Article in International immunology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 49 citations in OpenAlex.

  1. Toll like receptor 4 (TLR4) in neuroinflammation: From acute hemorrhagic stroke to chronic neurodegeneration.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2026
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  12. Type I Interferon Production of Plasmacytoid Dendritic Cells under Control.International journal of molecular sciences · 2021
    Review
  13. Article
  14. Review
  15. Review
  16. Regulating IRFs in IFN Driven Disease.Frontiers in immunology · 2019
    Review
  17. Article
  18. Review
  19. B Cell Defects Observed inJournal of immunology (Baltimore, Md. : 1950) · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Kei YasudaDepartment of Medicine, Renal Section, Boston University School of Medicine, Boston, MA 02118, USA. kyasuda@bu.edu
Kerstin Nündel
Amanda A Watkins
Tania Dhawan
Ramon G Bonegio
Jessalyn M Ubellacker
Ann Marshak-Rothstein
Ian R Rifkin
Boston University · USUniversity of Massachusetts Boston · USMassachusetts Academy of Math and Science at WPI · USRenal Research Institute · USUniversity of Massachusetts Chan Medical School · US

Funding

Toll-Like Receptors in Systemic Autoimmune DiseaseP01AR050256 · NIAMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MARSHAK-ROTHSTEIN, ANN · 2004 to 2013
$13.4M
RESEARCH TRAINING IN NEPHROLOGYT32DK007053 · NIDDK · BOSTON UNIVERSITY MEDICAL CAMPUS · PI RIFKIN, IAN R · 1986 to 2019
$3.9M
Endogenous RNA Ligands For Toll-like Receptors In Immune-Complex NephritisR01DK095058 · NIDDK · BOSTON MEDICAL CENTER · PI BONEGIO, RAMON G.B. · 2012 to 2016
$1.8M
Inflammation, PXR Modification and Drug DispositionR01DK090558 · NIDDK · UNIVERSITY OF KANSAS LAWRENCE · PI STAUDINGER, JEFFREY L · 2011 to 2014
$1.3M
Role of interferon regulatory factor-5 in B cell development and functionK01AR060857 · NIAMS · BOSTON MEDICAL CENTER · PI YASUDA, KEI · 2011 to 2015
$617k
NIAID NIH HHS AI007309-23NIAMS NIH HHS 1K01AR060857-01NIAMS NIH HHS K01 AR060857NIAMS NIH HHS P01 AR050256NIDDK NIH HHS R01 DK090558NIDDK NIH HHS R01 DK095058NIDDK NIH HHS T32 DK007053NIDDK NIH HHS T32DK007053
6 · The paper itself

Abstract

Interferon regulatory factor 5-deficient (IRF5 (-/-) ) mice have been used for many studies of IRF5 biology. A recent report identifies a mutation in dedicator of cytokinesis 2 (DOCK2) as being responsible for the abnormal B-cell development phenotype observed in the IRF5 (-/-) line. Both dedicator of cytokinesis 2 (DOCK2) and IRF5 play important roles in immune cell function, raising the issue of whether immune effects previously associated with IRF5 are due to IRF5 or DOCK2. Here, we defined the insertion end-point of the DOCK2 mutation and designed a novel PCR to detect the mutation in genomic DNA. We confirmed the association of the DOCK2 mutation and the abnormal B-cell phenotype in our IRF5 (-/-) line and also established another IRF5 (-/-) line without the DOCK2 mutation. These two lines were used to compare the role of IRF5 in dendritic cells (DCs) and B cells in the presence or absence of the DOCK2 mutation. IRF5 deficiency reduces IFN-α, IFN-β and IL-6 production by Toll-like receptor 9 (TLR9)- and TLR7-stimulated DCs and reduces TLR7- and TLR9-induced IL-6 production by B cells to a similar extent in the two lines. Importantly however, IRF5 (-/-) mice with the DOCK2 mutation have higher serum levels of IgG1 and lower levels of IgG2b, IgG2a/c and IgG3 than IRF5 (-/-) mice without the DOCK2 mutation, suggesting that the DOCK2 mutation confers additional Th2-type effects. Overall, these studies help clarify the function of IRF5 in B cells and DCs in the absence of the DOCK2 mutation. In addition, the PCR described will be useful for other investigators using the IRF5 (-/-) mouse line.

Indexed as

AnimalsB-LymphocytesDendritic CellsGTPase-Activating ProteinsGuanine Nucleotide Exchange FactorsInterferon Regulatory FactorsMiceMice, Inbred C57BLMice, KnockoutMutationPhenotypeDOCK2 protein, mouseGTPase-Activating ProteinsGuanine Nucleotide Exchange FactorsInterferon Regulatory FactorsIrf5 protein, mouse

Identifiers

PMID23291967
PMCPMC3631000
OpenAlexW2168434376

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.