Evidence map›Paper›PMID 23290917›Full record

ArticleMolecular cell2013

53BP1 alters the landscape of DNA rearrangements and suppresses AID-induced B cell lymphoma.

Mila Jankovic, Niklas Feldhahn, Thiago Y Oliveira, Israel T Silva, Kyong-Rim Kieffer-Kwon, Arito Yamane, Wolfgang Resch, Isaac Klein, Davide F Robbiani, Rafael Casellas and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
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  7. Review
  8. Parp3 promotes long-range end joining in murine cells.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  9. Article
  10. Writing, erasing and reading histone lysine methylations.Experimental & molecular medicine · 2017
    Review
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Mila JankovicLaboratory of Molecular Immunology, Rockefeller University, New York, NY 10065, USA.
Niklas Feldhahn
Thiago Y Oliveira
Israel T Silva
Kyong-Rim Kieffer-Kwon
Arito Yamane
Wolfgang Resch
Isaac Klein
Davide F Robbiani
Rafael Casellas
Michel C Nussenzweig
Rockefeller University · USNational Institutes of Health · USClinics Hospital of Ribeirão Preto · BRHoward Hughes Medical Institute · US

Funding

RAG and AID biologyZIAAR041148 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI O'SHEA, JOHN · 2009 to 2025
$44.8M
Class Switch Recombination in B LymphocytesR37AI037526 · NIAID · ROCKEFELLER UNIVERSITY · PI NUSSENZWEIG, MICHEL C · 2014 to 2023
$5.4M
SIGNALLING PATHWAYS IN AUTOIMMUNITYR01AI037526 · NIAID · ROCKEFELLER UNIVERSITY · PI NUSSENZWEIG, MICHEL C · 1994 to 2012
$5.0M
Howard Hughes Medical InstituteNIAID NIH HHS AI037526NIAID NIH HHS R01 AI037526NIAID NIH HHS R37 AI037526
6 · The paper itself

Abstract

Deficiencies in factors that regulate the DNA damage response enhance the incidence of malignancy by destabilizing the genome. However, the precise influence of the DNA damage response on regulation of cancer-associated rearrangements is not well defined. Here we examine the genome-wide impact of tumor protein P53-binding protein 1 (53BP1) deficiency in lymphoma and translocation. While both activation-induced cytidine deaminase (AID) and 53BP1 have been associated with cancer in humans, neither AID overexpression nor loss of 53BP1 is sufficient to produce malignancy. However, the combination of 53BP1 deficiency and AID deregulation results in B cell lymphoma. Deep sequencing of the genome of 53BP1(-/-) cancer cells and translocation capture sequencing (TC-Seq) of primary 53BP1(-/-) B cells revealed that their chromosomal rearrangements differ from those found in wild-type cells in that they show increased DNA end resection. Moreover, loss of 53BP1 alters the translocatome by increasing rearrangements to intergenic regions.

Indexed as

Gene RearrangementAICDA (Activation-Induced Cytidine Deaminase)AnimalsCells, CulturedCell Transformation, NeoplasticChromosomal Proteins, Non-HistoneChromosomes, MammalianCytidine DeaminaseDNA-Binding ProteinsEpigenesis, GeneticGenes, Tumor SuppressorGenome-Wide Association StudyLymphoma, B-CellMiceMice, KnockoutMutationAICDA (Activation-Induced Cytidine Deaminase)Chromosomal Proteins, Non-HistoneCytidine DeaminaseDNA-Binding ProteinsTrp53bp1 protein, mouseTumor Suppressor p53-Binding Protein 1

Identifiers

PMID23290917
PMCPMC3658150
OpenAlexW2011198783

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.