Evidence map›Paper›PMID 23290502›Full record

ArticleDrug and alcohol dependence2013

Serotonin transporter and receptor genes significantly impact nicotine dependence through genetic interactions in both European American and African American smokers.

Zhongli Yang, Chamindi Seneviratne, Shaolin Wang, Jennie Z Ma, Thomas J Payne, Jundong Wang, Ming D Li

Abstract readMulticenter Study
In one paragraph

Article in Drug and alcohol dependence, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Serotonin ReceptorInternational journal of environmental research and public health · 2022
    Article
  4. VMAT2 gene (Pharmacogenomics · 2019
    Article
  5. Article
  6. Article
  7. Manifesto for a European research network into Problematic Usage of the Internet.European neuropsychopharmacology : the journal of the European College of Neuropsychopharmacology · 2018
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Zhongli YangShanxi Key Laboratory of Environmental Veterinary Science, Shanxi Agricultural University, Shanxi, China.
Chamindi Seneviratne
Shaolin Wang
Jennie Z Ma
Thomas J Payne
Jundong Wang
Ming D Li
University of Virginia · USShanxi Agricultural University · CNUniversity of Mississippi Medical Center · US

Funding

MAPPING OF SUSCEPTIBILITY LOCI FOR NICOTINE DEPENDENCER01DA012844 · NIDA · UNIVERSITY OF VIRGINIA · PI LI, MING D · 1999 to 2013
$10.0M
NIDA NIH HHS DA012844NIDA NIH HHS R01 DA012844
6 · The paper itself

Abstract

backgroundPharmacologic studies implicate a significant role of genes encoding the serotonin transporter (SLC6A4) and the 5-HT3AB subunits HTR3A and HTR3B in nicotine dependence (ND). However, whether they are involved in ND remains largely unknown.

methodsHere, we examined the impact of variations in the three genes on ND in 1366 individuals from 402 African American (AA) and 671 individuals from 200 European American (EA) families. The ND of each smoker was assessed with smoking quantity (SQ), heaviness of smoking index (HSI), and Fagerström test for nicotine dependence (FTND).

resultsAssociation analysis revealed marginal association of rs10160548 in HTR3A with SQ and HSI in AA, 5-HTTLPR in SLC6A4 with FTND in EA, and rs11606194 in HTR3B with SQ and FTND in the pooled sample. Haplotype-based association analysis revealed a few major haplotypes in HTR3A that were significantly associated with ND in the AA, EA, and pooled samples. However, none of these associations remained significant after correcting for multiple testing except for a haplotype G-C-C-T-A-T formed by SNPs rs1150226, rs1062613, rs33940208, rs1985242, rs2276302, and rs10160548 in HTR3A for the AA sample. Considering biological functions of the three genes, we examined interactive effects of variants in the three genes, which revealed significant interactions among rs1062613 and rs10160548 in HTR3A, rs1176744 in HTR3B, and 5-HTTLPR and rs1042173 in SLC6A4 in affecting ND in the three samples.

conclusionsWe conclude that SLC6A4, HTR3A and HTR3B play a significant role in ND through genetic interactions.

Indexed as

AdultBlack or African AmericanEpistasis, GeneticFemaleHumansMaleMiddle AgedPolymorphism, Single NucleotideReceptors, Serotonin, 5-HT3Serotonin Plasma Membrane Transport ProteinsTobacco Use DisorderWhite PeopleHTR3A protein, humanHTR3B protein, humanReceptors, Serotonin, 5-HT3Serotonin Plasma Membrane Transport ProteinsSLC6A4 protein, human

Identifiers

PMID23290502
PMCPMC3628090
OpenAlexW2040125600

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.