Evidence map›Paper›PMID 23289016›Full record

ArticleInternational journal of biological sciences2013

Tuning of alternative splicing--switch from proto-oncogene to tumor suppressor.

Aleksandra Shchelkunova, Boris Ermolinsky, Meghan Boyle, Ivan Mendez, Michael Lehker, Karen S Martirosyan, Alexander V Kazansky

Open access · goldAbstract read
In one paragraph

Article in International journal of biological sciences, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Aleksandra ShchelkunovaDepartment of Biomedicine, The University of Texas at Brownsville, Brownsville, TX 78520, USA.
Boris Ermolinsky
Meghan Boyle
Ivan Mendez
Michael Lehker
Karen S Martirosyan
Alexander V Kazansky
Brownsville Public Library · US

Funding

Novel nanotechnology approach to target prostate cancerSC3GM087201 · NIGMS · UNIV/TEXAS BROWNSVILLE & SOUTHMOST COLL · PI KAZANSKY, ALEXANDER V · 2009 to 2012
$377k
NIGMS NIH HHS SC3GM087201
6 · The paper itself

Abstract

STAT5B, a specific member of the STAT family, is intimately associated with prostate tumor progression. While the full form of STAT5B is thought to promote tumor progression, a naturally occurring truncated isoform acts as a tumor suppressor. We previously demonstrated that truncated STAT5 is generated by insertion of an alternatively spliced exon and results in the introduction of an early termination codon. Present approaches targeting STAT proteins based on inhibition of functional domains of STAT's, such as DNA-binding, cooperative binding (protein-protein interaction), dimerization and phosphorylation will halt the action of the entire gene, both the proto-oncogenic and tumor suppressor functions of Stat5B. In this report we develop a new approach aimed at inhibiting the expression of full-length STAT5B (a proto-oncogene) while simultaneously enhancing the expression of STAT5∆B (a tumor suppressor). We have demonstrated the feasibility of using steric-blocking splice-switching oligonucleotides (SSOs) with a complimentary sequence to the targeted exon-intron boundary to enhance alternative intron/exon retention (up to 10%). The functional effect of the intron/exon proportional tuning was validated by cell proliferation and clonogenic assays. The new scheme applies specific steric-blocking splice-switching oligonucleotides and opens an opportunity for anti-tumor treatment as well as for the alteration of functional abilities of other STAT proteins.

Indexed as

Alternative SplicingCell CycleCell Line, TumorGenes, Tumor SuppressorHumansMaleOligonucleotidesProto-Oncogene MasProto-OncogenesRNA SplicingSTAT5 Transcription FactorMAS1 protein, humanOligonucleotidesProto-Oncogene MasSTAT5 Transcription Factorcell-cycle progression.RNA splicingsplice-switching oligonucleotidesSTAT proteinstumor suppressor

Identifiers

PMID23289016
PMCPMC3535533
OpenAlexW2116388232

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.