Evidence map›Paper›PMID 23288934›Full record

ArticleGenetics2013

The border between the ultrabithorax and abdominal-A regulatory domains in the Drosophila bithorax complex.

Welcome Bender, Maura Lucas

Abstract read
In one paragraph

Article in Genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Molecular and genetic characterization ofmicroPublication biology · 2024
    Article
  6. Article
  7. Article
  8. Transcriptional Readthrough Interrupts Boundary Function in Drosophila.International journal of molecular sciences · 2023
    Article
  9. Boundary Bypass Activity in thebioRxiv : the preprint server for biology · 2023
    Article
  10. Transcriptional read through interrupts boundary function in Drosophila.bioRxiv : the preprint server for biology · 2023
    Article
  11. Article
  12. Mechanisms of Interaction between Enhancers and Promoters in ThreeInternational journal of molecular sciences · 2023
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Mechanisms of Enhancer-Promoter Interactions in Higher Eukaryotes.International journal of molecular sciences · 2021
    Review
  18. Homeotic Genes: Clustering, Modularity, and Diversity.Frontiers in cell and developmental biology · 2021
    Review
  19. The insulator functions of theScience advances · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Welcome BenderDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.
Maura Lucas

Funding

MOLECULAR GENETICS OF TWO LOCIR01GM028630 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI BENDER, WELCOME · 1985 to 2017
$3.8M
NIGMS NIH HHS R01 GM028630NIGMS NIH HHS R01-GM28630
6 · The paper itself

Abstract

The bithorax complex in Drosophila melanogaster includes three homeobox-containing genes--Ultrabithorax (Ubx), abdominal--A (abd-A), and Abdominal-B (Abd-B)-which are required for the proper differentiation of the posterior 10 segments of the body. Each of these genes has multiple distinct regulatory regions; there is one for each segmental unit of the body plan where the genes are expressed. One additional protein- coding gene in the bithorax complex, Glut3, a sugar-transporter homolog, can be deleted without phenotype. We focus here on the upstream regulatory region for Ubx, the bithoraxoid (bxd) domain, and its border with the adjacent infraabdominal-2 (iab-2) domain, which controls abdA. These two domains can be defined by the phenotypes of rearrangement breakpoints, and by the expression patterns of enhancer traps. In D. virilis, the homeotic cluster is split between Ubx and abd-A, and so the border can also be located by a sequence comparison between species. When the border region is deleted in melanogaster, the flies show a dominant phenotype called Front-ultraabdominal (Fub); the first abdominal segment is transformed into a copy of the second abdominal segment. Thus, the border blocks the spread of activation from the bxd domain into the iab-2 domain.

Indexed as

Regulatory Sequences, Nucleic AcidAmino Acid SequenceAnimalsBase SequenceChromosome BreakpointsChromosomes, InsectDrosophila melanogasterDrosophila ProteinsGlucose Transporter Type 3Homeodomain ProteinsMolecular Sequence DataNuclear ProteinsPhenotypeSequence DeletionSequence HomologyTranscription Factorsabd-A protein, DrosophilaAbd-B proteins, DrosophilaDrosophila ProteinsGlucose Transporter Type 3Homeodomain ProteinsNuclear ProteinsTranscription FactorsUbx protein, Drosophila

Identifiers

PMID23288934
PMCPMC3606092

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.