Evidence map›Paper›PMID 23288422›Full record

ArticleThe Journal of general virology2013

Chimpanzee GB virus C and GB virus A E2 envelope glycoproteins contain a peptide motif that inhibits human immunodeficiency virus type 1 replication in human CD4⁺ T-cells.

James H McLinden, Jack T Stapleton, Donna Klinzman, Krishna K Murthy, Qing Chang, Thomas M Kaufman, Nirjal Bhattarai, Jinhua Xiang

Open access · greenAbstract read
In one paragraph

Article in The Journal of general virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Trial
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

James H McLindenDepartment of Internal Medicine, Division of Infectious Diseases, Iowa City Veterans Affairs Medical Center and the University of Iowa, Iowa City, IA 52242, USA.
Jack T StapletonInterdisciplinary Program on Molecular and Cellular Biology, Iowa City Veterans Affairs Medical Center and the University of Iowa, Iowa City, IA 52242, USA.
Donna KlinzmanDepartment of Internal Medicine, Division of Infectious Diseases, Iowa City Veterans Affairs Medical Center and the University of Iowa, Iowa City, IA 52242, USA.
Krishna K MurthyDepartment of Virology and Immunology, Texas Biomedical Research Institute, San Antonio, TX 78227, USA.
Qing ChangDepartment of Internal Medicine, Division of Infectious Diseases, Iowa City Veterans Affairs Medical Center and the University of Iowa, Iowa City, IA 52242, USA.
Thomas M KaufmanDepartment of Internal Medicine, Division of Infectious Diseases, Iowa City Veterans Affairs Medical Center and the University of Iowa, Iowa City, IA 52242, USA.
Nirjal BhattaraiInterdisciplinary Program on Molecular and Cellular Biology, Iowa City Veterans Affairs Medical Center and the University of Iowa, Iowa City, IA 52242, USA.
Jinhua XiangDepartment of Internal Medicine, Division of Infectious Diseases, Iowa City Veterans Affairs Medical Center and the University of Iowa, Iowa City, IA 52242, USA.
University of Iowa · USTexas Biomedical Research Institute · US

Funding

The Southwest National Primate Research Center Supplement- Infrastructure improvements of ABSL2 holding areasP51OD011133 · OD · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI Larry S. Schlesinger · 2012 to 2026
$129.7M
GB Virus type C Natural History, Epidemiology, HIV InteractionR01AI058740 · NIAID · UNIVERSITY OF IOWA · PI STAPLETON, JACK T. · 2004 to 2012
$5.5M
NIAID NIH HHS R01 AI058740NIAID NIH HHS R01 AI-58740NIH HHS P51 OD011133
6 · The paper itself

Abstract

GB virus type C (GBV-C) is a lymphotropic virus that can cause persistent infection in humans. GBV-C is not associated with any disease, but is associated with reduced mortality in human immunodeficiency virus type 1 (HIV-1)-infected individuals. Related viruses have been isolated from chimpanzees (GBV-Ccpz) and from New World primates (GB virus type A, GBV-A). These viruses are also capable of establishing persistent infection. We determined the nucleotide sequence encoding the envelope glycoprotein (E2) of two GBV-Ccpz isolates obtained from the sera of captive chimpanzees. The deduced GBV-Ccpz E2 protein differed from human GBV-C by 31 % at the amino acid level. Similar to human GBV-C E2, expression of GBV-Ccpz E2 in a tet-off human CD4(+) Jurkat T-cell line significantly inhibited the replication of diverse HIV-1 isolates. This anti-HIV-replication effect of GBV-Ccpz E2 protein was reversed by maintaining cells in doxycycline to reduce E2 expression. Previously, we found a 17 aa region within human GBV-C E2 that was sufficient to inhibit HIV-1. Although GBV-Ccpz E2 differed by 3 aa differences in this region, the chimpanzee GBV-C 17mer E2 peptide inhibited HIV-1 replication. Similarly, the GBV-A peptide that aligns with this GBV-C E2 region inhibited HIV-1 replication despite sharing only 5 aa with the human GBV-C E2 sequence. Thus, despite amino acid differences, the peptide region on both the GBV-Ccpz and the GBV-A E2 protein inhibit HIV-1 replication similar to human GBV-C. Consequently, GBV-Ccpz or GBV-A infection of non-human primates may provide an animal model to study GB virus-HIV interactions.

Indexed as

Viral InterferenceVirus ReplicationAnimalsCD4-Positive T-LymphocytesGB virus AGB virus CHIV-1HumansJurkat CellsMolecular Sequence DataPan troglodytesSequence Analysis, DNAViral Envelope ProteinsViral Envelope Proteins

Identifiers

PMID23288422
PMCPMC3709681
OpenAlexW2117082523

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.