Evidence map›Paper›PMID 23285195›Full record

ArticlePloS one2012

Yeast Gis2 and its human ortholog CNBP are novel components of stress-induced RNP granules.

Marta Rojas, George W Farr, Cesar F Fernandez, Laura Lauden, John C McCormack, Sandra L Wolin

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Surveying the global landscape of post-transcriptional regulators.Nature structural & molecular biology · 2023
    Article
  4. Article
  5. eLife · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Marta RojasDepartment of Cell Biology, Yale University School of Medicine, New Haven, Connecticut, USA.
George W Farr
Cesar F Fernandez
Laura Lauden
John C McCormack
Sandra L Wolin
Yale University · US

Funding

RNA quality control and environmental stressR01GM073863 · NIGMS · YALE UNIVERSITY · PI TSCHUDI, CHRISTIAN · 2005 to 2017
$3.6M
Biogenesis of Small RNAsR01GM048410 · NIGMS · YALE UNIVERSITY · PI WOLIN, SANDRA L. · 1998 to 2009
$2.2M
The Role of SSD1 in Handling of Oxidized RNAs in Saccharomyces CerevisiaeF32ES017387 · NIEHS · YALE UNIVERSITY · PI MCCORMACK, JOHN CRISLER · 2009 to 2011
$151k
Howard Hughes Medical InstituteNIEHS NIH HHS F32 ES017387NIEHS NIH HHS F32-ES017387NIGMS NIH HHS R01 GM048410NIGMS NIH HHS R01-GM048410NIGMS NIH HHS R01 GM073863NIGMS NIH HHS R01-GM073863
6 · The paper itself

Abstract

Although a CCTG expansion in the gene encoding the zinc knuckle protein CNBP causes a common form of muscular dystrophy, the function of both human CNBP and its putative budding yeast ortholog Gis2 remain poorly understood. Here we report the protein interactions of Gis2 and the subcellular locations of both Gis2 and CNBP. We found that Gis2 exhibits RNA-dependent interactions with two proteins involved in mRNA recognition, the poly(A) binding protein and the translation initiation factor eIF4G. We show that Gis2 is a component of two large RNA-protein granules, processing bodies and stress granules, which contain translationally repressed mRNAs. Consistent with a functional ortholog, CNBP also associates with the poly(A) binding protein and accumulates in stress granules during arsenite treatment of human cells. These results implicate both Gis2 and CNBP in mRNA handling during stress.

Indexed as

Stress, PhysiologicalCytoplasmic GranulesHeLa CellsHumansPolyribosomesProtein BindingProtein BiosynthesisRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerRNA StabilitySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCNBP protein, humanGis2 protein, S cerevisiaeRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID23285195
PMCPMC3528734
OpenAlexW2026982122

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.