Evidence map›Paper›PMID 23284307›Full record

ArticlePLoS genetics2012

Mi2β is required for γ-globin gene silencing: temporal assembly of a GATA-1-FOG-1-Mi2 repressor complex in β-YAC transgenic mice.

Flávia C Costa, Halyna Fedosyuk, Allen M Chazelle, Renee Y Neades, Kenneth R Peterson

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Oxidative Stress in β-Thalassemia.Molecular diagnosis & therapy · 2019
    Review
  3. Engineering Globin Gene Expression.Molecular therapy. Methods & clinical development · 2019
    Review
  4. Article
  5. Mouse Models of Erythropoiesis and Associated Diseases.Methods in molecular biology (Clifton, N.J.) · 2018
    Review
  6. Review
  7. Gene Therapy for β-Hemoglobinopathies.Molecular therapy : the journal of the American Society of Gene Therapy · 2017
    Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Epigenetic regulation of fetal globin gene expression in adult erythroid cells.Translational research : the journal of laboratory and clinical medicine · 2015
    Review
  16. The nucleosome remodeling and deacetylase complex in development and disease.Translational research : the journal of laboratory and clinical medicine · 2015
    Review
  17. Review
  18. Article
  19. Transcriptional mechanisms underlying hemoglobin synthesis.Cold Spring Harbor perspectives in medicine · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Flávia C CostaDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, USA.
Halyna Fedosyuk
Allen M Chazelle
Renee Y Neades
Kenneth R Peterson
University of Kansas Medical Center · US

Funding

Regulation of Globin Gene Switching in Human ES CellsR01HL067336 · NHLBI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R · 2001 to 2004
$1.5M
Transactivation of Fetal HemoglobinR01DK081290 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R · 2008 to 2011
$1.4M
Locus-linked Regulatory Motifs of Globin Gene SwitchingR56HL067336 · NHLBI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R · 2008 to 2008
$368k
Transactivation of Fetal HemoglobinR56DK081290 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R · 2007 to 2007
$110k
NHLBI NIH HHS HL067336NHLBI NIH HHS R01 HL067336NHLBI NIH HHS R56 HL067336NIDDK NIH HHS DK081290NIDDK NIH HHS R01 DK081290NIDDK NIH HHS R56 DK081290
6 · The paper itself

Abstract

Activation of γ-globin gene expression in adults is known to be therapeutic for sickle cell disease. Thus, it follows that the converse, alleviation of repression, would be equally effective, since the net result would be the same: an increase in fetal hemoglobin. A GATA-1-FOG-1-Mi2 repressor complex was recently demonstrated to be recruited to the -566 GATA motif of the (A)γ-globin gene. We show that Mi2β is essential for γ-globin gene silencing using Mi2β conditional knockout β-YAC transgenic mice. In addition, increased expression of (A)γ-globin was detected in adult blood from β-YAC transgenic mice containing a T>G HPFH point mutation at the -566 GATA silencer site. ChIP experiments demonstrated that GATA-1 is recruited to this silencer at day E16, followed by recruitment of FOG-1 and Mi2 at day E17 in wild-type β-YAC transgenic mice. Recruitment of the GATA-1-mediated repressor complex was disrupted by the -566 HPFH mutation at developmental stages when it normally binds. Our data suggest that a temporal repression mechanism is operative in the silencing of γ-globin gene expression and that either a trans-acting Mi2β knockout deletion mutation or the cis-acting -566 (A)γ-globin HPFH point mutation disrupts establishment of repression, resulting in continued γ-globin gene transcription during adult definitive erythropoiesis.

Indexed as

Erythropoiesisgamma-GlobinsGATA1 Transcription FactorMi-2 Nucleosome Remodeling and Deacetylase ComplexNuclear ProteinsTranscription FactorsAnemia, Sickle CellAnimalsbeta-GlobinsChromosomes, Artificial, YeastEmbryonic DevelopmentFetal HemoglobinGene Expression Regulation, DevelopmentalGene SilencingMiceMice, Transgenicbeta-GlobinsFetal Hemoglobingamma-GlobinsGata1 protein, mouseGATA1 Transcription FactorMi-2 Nucleosome Remodeling and Deacetylase ComplexNuclear ProteinsTranscription FactorsZfpm1 protein, mouse

Identifiers

PMID23284307
PMCPMC3527334
OpenAlexW2149659073

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.