Evidence map›Paper›PMID 23281113›Full record

ArticleProtein science : a publication of the Protein Society2013

Hepatitis E virus capsid protein assembles in 4M urea in the presence of salts.

Chunyan Yang, Huirong Pan, Minxi Wei, Xiao Zhang, Nan Wang, Ying Gu, Hailian Du, Jun Zhang, Shaowei Li, Ningshao Xia

Open access · greenAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. EngineeringVaccines · 2024
    Review
  4. Prophylactic Hepatitis E Vaccine.Advances in experimental medicine and biology · 2023
    Article
  5. NPJ vaccines · 2017
    Article
  6. Hepatitis E virus: Current epidemiology and vaccine.Human vaccines & immunotherapeutics · 2016
    Review
  7. Review
  8. The development of a recombinant hepatitis E vaccine HEV 239.Human vaccines & immunotherapeutics · 2015
    Review
  9. Review
  10. Subviral particle as vaccine and vaccine platform.Current opinion in virology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Chunyan YangNational Institute of Diagnostics and Vaccine Development in Infectious Disease, School of Life Sciences, Xiamen University, Xiamen 361005, People's Republic of China.
Huirong Pan
Minxi Wei
Xiao Zhang
Nan Wang
Ying Gu
Hailian Du
Jun Zhang
Shaowei Li
Ningshao Xia
Xiamen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The hepatitis E virus (HEV) capsid protein has been demonstrated to be able to assemble into particles in vitro. However, this process and the mechanism of protein-protein interactions during particle assembly remain unclear. In this study, we investigated the assembly mechanism of HEV structural protein subunits, the capsid protein p239 (aa368-606), using analytical ultracentrifugation. It was the first to observe that the p239 can form particles in 4M urea as a result of supplementation with salt, including ammonium sulfate [(NH₄)₂SO₄], sodium sulfate (Na₂SO₄), sodium chloride (NaCl), and ammonium chloride (NH₄Cl). Interestingly, it is the ionic strength that determines the efficiency of promoting particle assembly. The assembly rate was affected by temperature and salt concentration. When (NH₄)₂SO₄ was used, assembling intermediates of p239 with sedimentation coefficient values of approximately 5 S, which were mostly dodecamers, were identified for the first time. A highly conserved 28-aa region (aa368-395) of p239 was found to be critical for particle assembly, and the hydrophobic residues Leu³⁷², Leu³⁷⁵, and Leu³⁹⁵ of p239 was found to be critical for particle assembly, which was revealed by site-directed mutagenesis. This study provides new insights into the assembly mechanism of native HEV, and contributes a valuable basis for further investigations of protein assembly by hydrophobic interactions under denaturing conditions.

Indexed as

Ammonium ChlorideAmmonium SulfateCapsid ProteinsHepatitis E virusHydrophobic and Hydrophilic InteractionsIndicators and ReagentsKineticsMutant ProteinsOsmolar ConcentrationParticle SizePeptide FragmentsProtein Interaction Domains and MotifsProtein RefoldingProtein StabilityProtein UnfoldingRecombinant ProteinsAmmonium ChlorideAmmonium SulfateCapsid ProteinsIndicators and ReagentsMutant ProteinsPeptide FragmentsRecombinant ProteinsSodium Chloridesodium sulfateSulfatesUrea

Identifiers

PMID23281113
PMCPMC3595462
OpenAlexW2102897036

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.