Evidence map›Paper›PMID 23281054›Full record

ArticleBioEssays : news and reviews in molecular, cellular and developmental biology2013

Population transcriptomics with single-cell resolution: a new field made possible by microfluidics: a technology for high throughput transcript counting and data-driven definition of cell types.

Charles Plessy, Linda Desbois, Teruo Fujii, Piero Carninci

Abstract read
In one paragraph

Article in BioEssays : news and reviews in molecular, cellular and developmental biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. [Preliminary study on the construction of three-dimensional hippocampal neural network by using microfluidic technologyZhongguo xiu fu chong jian wai ke za zhi = Zhongguo xiufu chongjian waike zazhi = Chinese journal of reparative and reconstructive surgery · 2019
    Article
  2. Article
  3. The International Nucleome Consortium.Nucleus (Austin, Tex.) · 2015
    Article
  4. Article
  5. Article
  6. Transcriptional mechanisms of cell fate decisions revealed by single cell expression profiling.BioEssays : news and reviews in molecular, cellular and developmental biology · 2014
    Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Charles PlessyRIKEN Omics Science Center, Suehiro-chô, Tsurumi-ku, Yokohama, Japan. plessy@riken.jp
Linda Desbois
Teruo Fujii
Piero Carninci

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tissues contain complex populations of cells. Like countries, which are comprised of mixed populations of people, tissues are not homogeneous. Gene expression studies that analyze entire populations of cells from tissues as a mixture are blind to this diversity. Thus, critical information is lost when studying samples rich in specialized but diverse cells such as tumors, iPS colonies, or brain tissue. High throughput methods are needed to address, model and understand the constitutive and stochastic differences between individual cells. Here, we describe microfluidics technologies that utilize a combination of molecular biology and miniaturized labs on chips to study gene expression at the single cell level. We discuss how the characterization of the transcriptome of each cell in a sample will open a new field in gene expression analysis, population transcriptomics, that will change the academic and biomedical analysis of complex samples by defining them as quantified populations of single cells.

Indexed as

TranscriptomeEukaryotic CellsGene Expression ProfilingHigh-Throughput Screening AssaysHumansLab-On-A-Chip DevicesMicrofluidicsRNA, MessengerSingle-Cell AnalysisRNA, Messenger

Identifiers

PMID23281054
PMCPMC3583089

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.