Evidence map›Paper›PMID 23279839›Full record

ArticleThe FEBS journal2013

Self-trimerization of ExsD limits inhibition of the Pseudomonas aeruginosa transcriptional activator ExsA in vitro.

Robert C Bernhards, Anne E Marsden, Shannon K Esher, Timothy L Yahr, Florian D Schubot

Open access · bronzeAbstract read
In one paragraph

Article in The FEBS journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Robert C BernhardsDepartment of Biological Sciences, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061-0910, USA.
Anne E Marsden
Shannon K Esher
Timothy L Yahr
Florian D Schubot
Virginia Tech · USUniversity of Iowa · US

Funding

TRAINING IN MECHANISMS OF PARASITISMT32AI007511 · NIAID · UNIVERSITY OF IOWA · PI BUTLER, NOAH SULLIVAN, WEBER, MARY · 1996 to 2025
$8.1M
Regulation of Pseudomonas aeruginosa type III secretionR01AI055042 · NIAID · UNIVERSITY OF IOWA · PI YAHR, TIMOTHY L · 2003 to 2021
$4.4M
Regulation of the P.aeruginosa Type III Secretion System by the Multifaceted TranR21AI101774 · NIAID · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI SCHUBOT, FLORIAN DAVID · 2012 to 2013
$375k
Regulation of Pseudomonas aeruginosa type III secretionR56AI055042 · NIAID · UNIVERSITY OF IOWA · PI YAHR, TIMOTHY L · 2016 to 2016
$339k
NIAID NIH HHS 1R21AI101774-01NIAID NIH HHS R01 AI055042NIAID NIH HHS R01-AI055042NIAID NIH HHS R21 AI101774NIAID NIH HHS R56 AI055042NIAID NIH HHS T32 AI007511
6 · The paper itself

Abstract

The opportunistic pathogen Pseudomonas aeruginosa ranks among the leading causes of nosocomial infection. The type III secretion system (T3SS) aids acute Pseudomonas aeruginosa infection by injecting potent cytotoxins into host cells to suppress the host's innate immune response. Expression of all T3SS-related genes is strictly dependent on the transcription factor ExsA. Consequently, ExsA and the biological processes that regulate ExsA function are of great biomedical interest. The present study focused on the ExsA-ExsC-ExsD-ExsE signaling cascade, which ties host cell contact to the upregulation of T3SS gene expression. Prior to T3SS induction, the antiactivator protein ExsD binds to ExsA and blocks ExsA-dependent transcription by interfering with ExsA dimerization and promoter interactions. Upon host cell contact, ExsD is sequestered by the T3SS chaperone ExsC, resulting in the release of ExsA and upregulation of the T3SS. Previous studies have shown that the ExsD-ExsA interactions are not freely reversible. Because independently folded ExsD and ExsA were not found to interact, it has been hypothesized that folding intermediates of the two proteins form the complex. Here, we demonstrate, for the first time, that ExsD alone is sufficient to inhibit ExsA-dependent transcription in vitro and that no other cellular factors are required. More significantly, we show that independently folded ExsD and ExsA are capable of interacting, but only at 37 °C and not at 30 °C. Guided by the crystal structure of ExsD, we designed a monomeric variant of the protein, and demonstrated that ExsD trimerization prevents ExsD from inhibiting ExsA-dependent transcription at 30 °C. We propose that this unique mechanism plays an important role in T3SS regulation.

Indexed as

Protein MultimerizationBacterial ProteinsBacterial Secretion SystemsGene Expression Regulation, BacterialMutagenesis, Site-DirectedMutation, MissensePromoter Regions, GeneticProtein BindingPseudomonas aeruginosaRepressor ProteinsTrans-ActivatorsTranscription, GeneticBacterial ProteinsBacterial Secretion SystemsExsA protein, bacteriaExsD protein, Pseudomonas aeruginosaRepressor ProteinsTrans-Activators

Identifiers

PMID23279839
PMCPMC3621117
OpenAlexW2001819947

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.