Evidence map›Paper›PMID 23277587›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Widespread horizontal transfer of retrotransposons.

Ali Morton Walsh, R Daniel Kortschak, Michael G Gardner, Terry Bertozzi, David L Adelson

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
10.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 149 citations in OpenAlex.

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  13. Genome Evolution and the Future of Phylogenomics of Non-Avian Reptiles.Animals : an open access journal from MDPI · 2023
    Review
  14. Review
  15. On the Base Composition of Transposable Elements.International journal of molecular sciences · 2022
    Review
  16. Article
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  20. Article

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ali Morton WalshSchool of Molecular and Biomedical Science, University of Adelaide, Adelaide, SA 5005, Australia.
R Daniel Kortschak
Michael G Gardner
Terry Bertozzi
David L Adelson
University of Adelaide · AUSouth Australian Museum · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In higher organisms such as vertebrates, it is generally believed that lateral transfer of genetic information does not readily occur, with the exception of retroviral infection. However, horizontal transfer (HT) of protein coding repetitive elements is the simplest way to explain the patchy distribution of BovB, a long interspersed element (LINE) about 3.2 kb long, that has been found in ruminants, marsupials, squamates, monotremes, and African mammals. BovB sequences are a major component of some of these genomes. Here we show that HT of BovB is significantly more widespread than believed, and we demonstrate the existence of two plausible arthropod vectors, specifically reptile ticks. A phylogenetic tree built from BovB sequences from species in all of these groups does not conform to expected evolutionary relationships of the species, and our analysis indicates that at least nine HT events are required to explain the observed topology. Our results provide compelling evidence for HT of genetic material that has transformed vertebrate genomes.

Indexed as

Evolution, MolecularGene Transfer, HorizontalRetroelementsAnimalsBase SequenceLong Interspersed Nucleotide ElementsMolecular Sequence DataPhylogenySequence AlignmentVertebratesRetroelements

Identifiers

PMID23277587
PMCPMC3549140
OpenAlexW2051312731

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.