Evidence map›Paper›PMID 23276142›Full record

ArticleJournal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research2013

HIV downregulates interferon-stimulated genes in primary macrophages.

Seong-Heon Wie, Pinyi Du, Tiffany Q Luong, Steffney E Rought, Nadejda Beliakova-Bethell, Jean Lozach, Jacques Corbeil, Richard S Kornbluth, Douglas D Richman, Christopher H Woelk

Abstract read
In one paragraph

Article in Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
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  4. Article
  5. UnravelingFrontiers in oncology · 2024
    Review
  6. Immunomodulatory Role of Interferons in Viral and Bacterial Infections.International journal of molecular sciences · 2023
    Review
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  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Seong-Heon WieDepartment of Internal Medicine, School of Medicine, The Catholic University of Korea, Seoul, South Korea.
Pinyi Du
Tiffany Q Luong
Steffney E Rought
Nadejda Beliakova-Bethell
Jean Lozach
Jacques Corbeil
Richard S Kornbluth
Douglas D Richman
Christopher H Woelk
VA San Diego Healthcare System · USUniversity of California, San Diego · USIllumina (United States) · USUniversité Laval · CA

Funding

Interferon Stimulated Genes with Antiviral Properties to HIV-1R21AI065242 · NIAID · VETERANS MEDICAL RESEARCH FDN/SAN DIEGO · PI WOELK, CHRISTOPHER H · 2006 to 2007
$377k
NIAID NIH HHS AI065242
6 · The paper itself

Abstract

HIV is able to outpace the innate immune response, including that mediated by interferon (IFN), to establish a productive infection. Primary macrophages, however, may be protected from HIV infection by treatment with type I IFN before virus exposure. The ability of HIV to modulate the type I IFN-mediated innate immune response when it encounters a cell that has already been exposed to IFN remains poorly defined. The optimal pretreatment time (12 h) and the most potent HIV-inhibitors (e.g., IFN-α2 and -ω) were identified to investigate the ability of HIV to modulate an established type I IFN response. Gene expression at the level of the entire transcriptome was then compared between primary macrophages treated with type I IFNs, as opposed to treated with IFNs and then infected with HIV. Although HIV was not able to establish a robust infection, the virus was able to downregulate a number of IFN-stimulated genes (ISGs) with a fold change greater than 1.5 (i.e., AXL, IFI27, IFI44, IFI44L, ISG15, OAS1, OAS3, and XAF1). The downregulation of OAS1 by the presence of HIV was confirmed by real-time quantitative polymerase chain reaction. In conclusion, even though HIV replication is significantly inhibited by IFN pretreatment, the virus is able to downregulate the transcription of known antiviral ISGs (e.g., IFI44, ISG15, and OAS1).

Indexed as

Cells, CulturedDown-RegulationHIVHIV InfectionsHumansInterferonsMacrophagesReal-Time Polymerase Chain ReactionInterferons

Identifiers

PMID23276142
PMCPMC3573720
OpenAlexW2041021719

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.