Evidence map›Paper›PMID 23275442›Full record

ArticleMolecular and cellular biology2013

The COP9 signalosome interacts with and regulates interferon regulatory factor 5 protein stability.

Justyna Korczeniewska, Betsy J Barnes

RetractedOpen access · bronzeAbstract readRetracted Publication
In one paragraph

Article in Molecular and cellular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Regulation of microglial activation in stroke.Acta pharmacologica Sinica · 2017
    Review
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  7. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Justyna KorczeniewskaDepartment of Biochemistry & Molecular Biology, New Jersey Medical School, New Jersey Medical School-University Hospital CancerCenter, UMDNJ, Newark, New Jersey, USA.
Betsy J Barnes
Rutgers New Jersey Medical School

Funding

ROLE OF IRF5 IN SLE PATHOGENESISR03AR054070 · NIAMS · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI BARNES, BETSY J · 2006 to 2008
$227k
NIAMS NIH HHS 5R03AR054070NIAMS NIH HHS R03 AR054070
6 · The paper itself

Abstract

The transcription factor interferon regulatory factor 5 (IRF5) exerts crucial functions in the regulation of host immunity against extracellular pathogens, DNA damage-induced apoptosis, death receptor signaling, and macrophage polarization. Tight regulation of IRF5 is thus warranted for an efficient response toward extracellular stressors and for limiting autoimmune and inflammatory responses. Here we report that the COP9 signalosome (CSN), a general modulator of diverse cellular and developmental processes, associates constitutively with IRF5 and promotes its protein stability. The constitutive CSN/IRF5 interaction was identified using proteomics and confirmed by endogenous immunoprecipitations. The CSN/IRF5 interaction occurred on the carboxyl and amino termini of IRF5; a single internal deletion from amino acids 455 to 466 (Δ455-466) was found to significantly reduce IRF5 protein stability. CSN subunit 3 (CSN3) was identified as a direct interacting partner of IRF5, and knockdown of this subunit with small interfering RNAs resulted in enhanced degradation. Degradation was further augmented by knockdown of CSN1 and CSN3 together. The ubiquitin E1 inhibitor UBEI-41 or the proteasome inhibitor MG132 prevented IRF5 degradation, supporting the idea that its stability is regulated by the ubiquitin-proteasome system. Importantly, activation of IRF5 by the death receptor ligand tumor necrosis factor-related apoptosis-inducing ligand (TRAIL) resulted in enhanced degradation via loss of the CSN/IRF5 interaction. This study defines CSN to be a new interacting partner of IRF5 that controls its stability.

Indexed as

Cell LineCOP9 Signalosome ComplexHEK293 CellsHumansInterferon Regulatory FactorsLeupeptinsMultiprotein ComplexesNuclear ProteinsPeptide HydrolasesProteasome Endopeptidase ComplexProtein BindingProtein KinasesProtein StabilityProtein SubunitsProteolysisTNF-Related Apoptosis-Inducing Ligandbenzyloxycarbonylleucyl-leucyl-leucine aldehydeCOP9 Signalosome ComplexInterferon Regulatory FactorsIRF5 protein, humanLeupeptinsMultiprotein ComplexesNuclear ProteinsPeptide HydrolasesProteasome Endopeptidase ComplexProtein KinasesProtein SubunitsTNF-Related Apoptosis-Inducing LigandTNFSF10 protein, humanUbiquitin

Identifiers

PMID23275442
PMCPMC3592028
OpenAlexW1985111586

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.