Evidence map›Paper›PMID 23275440›Full record

ArticleMolecular and cellular biology2013

Ribosomal protein S25 dependency reveals a common mechanism for diverse internal ribosome entry sites and ribosome shunting.

Marla I Hertz, Dori M Landry, Anne E Willis, Guangxiang Luo, Sunnie R Thompson

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 114 citations in OpenAlex.

  1. Article
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  4. Article
  5. Specialized ribosomes: integrating new insights and current challenges.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  6. Ribosomal protein S25 promotes cell cycle entry for a productive BK polyomavirus infection.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Archaea/eukaryote-specific ribosomal proteins - guardians of a complex structure.Computational and structural biotechnology journal · 2023
    Review
  12. Long non-coding RNAeLife · 2022
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Marla I HertzDepartment of Microbiology, University of Alabama, Birmingham, Alabama, USA.
Dori M Landry
Anne E Willis
Guangxiang Luo
Sunnie R Thompson
University of Alabama at Birmingham · USMedical Research Council · GB

Funding

XRAY CRYSTALLOGRAPHYP30CA013148 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Robert S Welner · 1985 to 2026
$165.9M
Mentored Experiences in Research, Instruction and Teaching (MERIT) Program - administrative supplementK12GM088010 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SCHNEIDER, DAVID ALAN · 2009 to 2024
$9.2M
Underlying Mechanisms of ApoE in HCV Infection and AssemblyR01AI097318 · NIAID · UNIVERSITY OF KENTUCKY · PI LUO, GUANGXIANG GEORGE · 2012 to 2016
$1.8M
Viral and Cellular Determinants of HCV AssemblyR01AI091953 · NIAID · UNIVERSITY OF KENTUCKY · PI LUO, GUANGXIANG GEORGE · 2011 to 2014
$1.5M
Mechanism of IRES-Mediated Translation InitiationR01GM084547 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI THOMPSON, SUNNIE R · 2009 to 2013
$1.4M
Medical Research Council MC_UP_A600_1023NCI NIH HHS P30 CA013148NCI NIH HHS P30 CA13148NIAID NIH HHS R01 AI091953NIAID NIH HHS R01 AI097318NIGMS NIH HHS 3R01GM084547-01A1S1NIGMS NIH HHS K12 GM088010NIGMS NIH HHS R01 GM084547NIGMS NIH HHS R01GM084547
6 · The paper itself

Abstract

During viral infection or cellular stress, cap-dependent translation is shut down. Proteins that are synthesized under these conditions use alternative mechanisms to initiate translation. This study demonstrates that at least two alternative translation initiation routes, internal ribosome entry site (IRES) initiation and ribosome shunting, rely on ribosomal protein S25 (RPS25). This suggests that they share a mechanism for initiation that is not employed by cap-dependent translation, since cap-dependent translation is not affected by the loss of RPS25. Furthermore, we demonstrate that viruses that utilize an IRES or a ribosome shunt, such as hepatitis C virus, poliovirus, or adenovirus, have impaired amplification in cells depleted of RPS25. In contrast, viral amplification of a virus that relies solely on cap-dependent translation, herpes simplex virus, is not hindered. We present a model that explains how RPS25 can be a nexus for multiple alternative translation initiation pathways.

Indexed as

Host-Pathogen InteractionsAdenoviridaeAdenoviridae InfectionsCell LineGene Knockdown TechniquesHeLa CellsHepacivirusHepatitis CHumansPoliomyelitisPoliovirusProtein BiosynthesisRibosomal ProteinsRibosomesVirus ReplicationRibosomal ProteinsRPS25 protein, human

Identifiers

PMID23275440
PMCPMC3623076
OpenAlexW2153960950

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.