Evidence map›Paper›PMID 23274991›Full record

ArticleJournal of microbiology (Seoul, Korea)2012

Expression and characterization of an iron-containing superoxide dismutase from Burkholderia pseudomallei.

Min-Hee Cho, Yong-Woo Shin, Jeong-Hoon Chun, Kee-Jong Hong, Byoung-Kuk Na, Gi-Eun Rhie, Baik-Lin Seong, Cheon-Kwon Yoo

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Article in Journal of microbiology (Seoul, Korea), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Min-Hee ChoDivision of High-Risk Pathogen Research, Center for Infectious Diseases, National Institute of Health, Chungbuk 363-951, Republic of Korea.
Yong-Woo Shin
Jeong-Hoon Chun
Kee-Jong Hong
Byoung-Kuk Na
Gi-Eun Rhie
Baik-Lin Seong
Cheon-Kwon Yoo
National Institutes of Health · USKorea National Institute of Health · KRYonsei University · KRGyeongsang National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A superoxide dismutase (SOD) gene from Burkholderia pseudomallei, the causative agent of melioidosis, was cloned and expressed in Escherichia coli, and its product was functionally and physically characterized. The gene has an open-reading frame of 579 bp. The deduced amino acid sequence has 192 residues with a calculated molecular mass of ~22 kDa. Sequence comparison with other bacterial SODs showed that the protein contains typical metal-binding motifs and other Fe-SOD-conserved residues. The sequence has substantial similarity with other bacterial Fe-SOD sequences. The enzymatic activity of the expressed protein was inhibited by hydrogen peroxide but not by sodium azide or potassium cyanide, attributes that indeed are characteristic of typical bacterial Fe-SODs. Western blotting with antiserum against the recombinant Fe-SOD revealed that it is expressed in B. pseudomallei. Transformed E. coli that expressed the Fe-SOD had significantly increased SOD activity and was highly tolerant to paraquat-mediated replication inhibition, compared to transformed cells carrying an empty vector. Our results provide a basis for further biochemical characterization of the enzyme and elucidation of its role in the pathogenesis of B. pseudomallei.

Indexed as

Gene ExpressionAmino Acid SequenceBurkholderia pseudomalleiCloning, MolecularMolecular Sequence DataOxidative StressRecombinant ProteinsSequence AlignmentSequence Analysis, DNASuperoxide DismutaseRecombinant ProteinsSuperoxide Dismutase

Identifiers

PMID23274991
OpenAlexW2084323970

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.