Evidence map›Paper›PMID 23274497›Full record

ArticleBiochemical and biophysical research communications2013

mir-30d Regulates multiple genes in the autophagy pathway and impairs autophagy process in human cancer cells.

Xiaojun Yang, Xiaomin Zhong, Janos L Tanyi, Jianfeng Shen, Congjian Xu, Peng Gao, Tim M Zheng, Angela DeMichele, Lin Zhang

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 101 citations in OpenAlex.

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  13. Mitophagy in neurological disorders.Journal of neuroinflammation · 2021
    Review
  14. Review
  15. Review
  16. Investigation the Role of Autophagy in Non-Small Cell Lung Cancer.Asian Pacific journal of cancer prevention : APJCP · 2021
    Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Xiaojun YangOvarian Cancer Research Center and Department of Obstetrics and Gynecology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Xiaomin Zhong
Janos L Tanyi
Jianfeng Shen
Congjian Xu
Peng Gao
Tim M Zheng
Angela DeMichele
Lin Zhang
University of Pennsylvania · USCancer Research Center · USGansu Provincial Hospital · CNObstetrics and Gynecology Hospital of Fudan University · CN

Funding

UNIVERSITY OF PENNSYLVANIA CAN CTR SUPPORT GRANTP30CA016520 · NCI · UNIVERSITY OF PENNSYLVANIA · PI SHELLEY L BERGER · 1985 to 2026
$222.3M
Therapeutic Micro RNA Strategies for Ovarian CancerP50CA083638 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI GODWIN, ANDREW K., GOLEMIS, ERICA A. · 1999 to 2013
$33.6M
REPRODUCTIVE SCIENTIST TRAINING PROGRAMK12HD000849 · NICHD · WASHINGTON UNIVERSITY · PI Danny J Schust · 1988 to 2026
$33.2M
The role of microRNA, mir-30d, in the initiation and progression of cancerR01CA142776 · NCI · UNIVERSITY OF PENNSYLVANIA · PI ZHANG, LIN · 2010 to 2014
$1.6M
NCI NIH HHS P30 CA016520NCI NIH HHS P50 CA083638NCI NIH HHS P50-CA83638-7951NCI NIH HHS R01 CA142776NCI NIH HHS R01-CA142776NICHD NIH HHS 5K12HD000849NICHD NIH HHS K12 HD000849
6 · The paper itself

Abstract

In human epithelial cancers, the microRNA (miRNA) mir-30d is amplified with high frequency and serves as a critical oncomir by regulating metastasis, apoptosis, proliferation, and differentiation. Autophagy, a degradation pathway for long-lived protein and organelles, regulates the survival and death of many cell types. Increasing evidence suggests that autophagy plays an important function in epithelial tumor initiation and progression. Using a combined bioinformatics approach, gene set enrichment analysis, and miRNA target prediction, we found that mir-30d might regulate multiple genes in the autophagy pathway including BECN1, BNIP3L, ATG12, ATG5, and ATG2. Our further functional experiments demonstrated that the expression of these core proteins in the autophagy pathway was directly suppressed by mir-30d in cancer cells. Finally, we showed that mir-30d regulated the autophagy process by inhibiting autophagosome formation and LC3B-I conversion to LC3B-II. Taken together, our results provide evidence that the oncomir mir-30d impairs the autophagy process by targeting multiple genes in the autophagy pathway. This result will contribute to understanding the molecular mechanism of mir-30d in tumorigenesis and developing novel cancer therapy strategy.

Indexed as

Gene Expression Regulation, NeoplasticApoptosis Regulatory ProteinsAutophagyAutophagy-Related Protein 12Autophagy-Related Protein 5Autophagy-Related ProteinsBeclin-1Carrier ProteinsCell Line, TumorCell Transformation, NeoplasticHumansMembrane ProteinsMicroRNAsMicrotubule-Associated ProteinsNeoplasmsProto-Oncogene ProteinsApoptosis Regulatory ProteinsATG12 protein, humanATG2B protein, humanATG5 protein, humanAutophagy-Related Protein 12Autophagy-Related Protein 5Autophagy-Related ProteinsBeclin-1BECN1 protein, humanBNIP3L protein, humanCarrier ProteinsMembrane ProteinsMicroRNAsMicrotubule-Associated ProteinsMIRN30b microRNA, humanProto-Oncogene ProteinsSmall Ubiquitin-Related Modifier ProteinsTumor Suppressor ProteinsVesicular Transport Proteins

Identifiers

PMID23274497
PMCPMC3578012
OpenAlexW2030536418

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.