Evidence map›Paper›PMID 23274112›Full record

ArticleJournal of molecular biology2013

Coilin displays differential affinity for specific RNAs in vivo and is linked to telomerase RNA biogenesis.

Hanna J Broome, Michael D Hebert

Abstract read
In one paragraph

Article in Journal of molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 31 citations in OpenAlex.

  1. A Novel Role for Coilin in Vertebrate Innate Immunity.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  2. Coilin and Cajal bodies.Nucleus (Austin, Tex.) · 2023
    Review
  3. Article
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  9. Biology and clinical relevance of noncoding sno/scaRNAs.Trends in cardiovascular medicine · 2018
    Review
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  11. Review
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  13. Article
  14. Article
  15. Article
  16. Coilin: The first 25 years.RNA biology · 2015
    Review
  17. Article
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  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Hanna J BroomeDepartment of Biochemistry, The University of Mississippi Medical Center, 2500 North State Street, Jackson, MS 39216-4505, USA. hjohnson@umc.edu
Michael D Hebert
State Street (United States) · US

Funding

Nuclear bodies and ribonucleoprotein biogenesisR01GM081448 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI HEBERT, MICHAEL D · 2008 to 2012
$1.5M
NIGMS NIH HHS R01 GM081448NIGMS NIH HHS R01GM081448
6 · The paper itself

Abstract

Coilin is widely known as the protein marker of the Cajal body, a subnuclear domain important to the biogenesis of small nuclear ribonucleoproteins and telomerase, complexes that are crucial to pre-messenger RNA splicing and telomere maintenance, respectively. Extensive studies have characterized the interaction between coilin and the various other protein components of CBs and related subnuclear domains; however, only a few have examined interactions between coilin and nucleic acid. We have recently published that coilin is tightly associated with nucleic acid, displays RNase activity in vitro, and is redistributed to the ribosomal RNA (rRNA)-rich nucleoli in cells treated with the DNA-damaging agents cisplatin and etoposide. Here, we report a specific in vivo association between coilin and rRNA, U small nuclear RNA (snRNA), and human telomerase RNA, which is altered upon treatment with DNA-damaging agents. Using chromatin immunoprecipitation, we provide evidence of coilin interaction with specific regions of U snRNA gene loci. We have also utilized bacterially expressed coilin fragments in order to map the region(s) important for RNA binding and RNase activity in vitro. Additionally, we provide evidence of coilin involvement in the processing of human telomerase RNA both in vitro and in vivo.

Indexed as

Binding, CompetitiveBinding SitesCell LineChromatin ImmunoprecipitationCoiled BodiesDNAElectrophoresis, Polyacrylamide GelHeLa CellsHumansMutationNuclear ProteinsProtein BindingReverse Transcriptase Polymerase Chain ReactionRibonucleasesRNARNA InterferenceDNANuclear Proteinsp80-coilinRibonucleasesRNARNA, RibosomalRNA, Small NuclearTelomerase

Identifiers

PMID23274112
PMCPMC3568234
OpenAlexW2167135571

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.