Evidence map›Paper›PMID 23272140›Full record

ArticlePloS one2012

A multiplexed microfluidic PCR assay for sensitive and specific point-of-care detection of Chlamydia trachomatis.

Deborah Dean, Rosemary S Turingan, Hans-Ulrich Thomann, Anna Zolotova, James Rothschild, Sandeep J Joseph, Timothy D Read, Eugene Tan, Richard F Selden

Abstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Laboratory detection methods for Chlamydia trachomatis infection in children: a review.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Deborah DeanCenter for Immunobiology and Vaccine Development, Children's Hospital Oakland Research Institute, Oakland, California, United States of America.
Rosemary S Turingan
Hans-Ulrich Thomann
Anna Zolotova
James Rothschild
Sandeep J Joseph
Timothy D Read
Eugene Tan
Richard F Selden

Funding

Multiplex diagnostic for biothreat C. psittaci & non-threat respiratory pathogensR01AI098843 · NIAID · CHILDREN'S HOSPITAL & RES CTR AT OAKLAND · PI DEAN, DEBORAH ANNE, READ, TIMOTHY D. · 2012 to 2016
$5.5M
A Rapid Point-of-care Diagnostic for C.trachomitis STDsR43AI084206 · NIAID · NETWORK BIOSYSTEMS, INC. · PI DEAN, DEBORAH ANNE, READ, TIMOTHY D. · 2009 to 2010
$880k
NIAID NIH HHS R01 AI098843NIAID NIH HHS R43 AI084206NIAID NIH HHS R43AI084206
6 · The paper itself

Abstract

backgroundChlamydia trachomatis (Ct) is the most common cause of bacterial sexually transmitted diseases (STD) worldwide. While commercial nucleic acid amplification tests (NAAT) are available for Ct, none are rapid or inexpensive enough to be used at the point-of-care (POC). Towards the first Ct POC NAAT, we developed a microfluidic assay that simultaneously interrogates nine Ct loci in 20 minutes. METHODOLOGY AND PRINCIPAL

findingsEndocervical samples were selected from 263 women at high risk for Ct STDs (∼35% prevalence). A head-to-head comparison was performed with the Roche-Amplicor NAAT. 129 (49.0%) and 88 (33.5%) samples were positive by multiplex and Amplicor assays, respectively. Sequencing resolved 71 discrepant samples, confirming 53 of 53 positive multiplex samples and 12 of 18 positive Amplicor samples. The sensitivity and specificity were 91.5% and 100%, and 62.4% and 95.9%, respectively, for multiplex and Amplicor assays. Positive and negative predictive values were 100% and 91%, and 94.1% and 68.6%, respectively.

conclusionsThis is the first rapid multiplex approach to Ct detection, and the assay was also found to be superior to a commercial NAAT. In effect, nine simultaneous reactions significantly increased sensitivity and specificity. Our assay can potentially increase Ct detection in globally diverse clinical settings at the POC.

Indexed as

MicrofluidicsMultiplex Polymerase Chain ReactionPoint-of-Care SystemsAdolescentAdultChlamydia InfectionsChlamydia trachomatisFemaleHumansPrevalenceReproducibility of ResultsSensitivity and SpecificityYoung Adult

Identifiers

PMID23272140
PMCPMC3522697

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.