Evidence map›Paper›PMID 23272121›Full record

ArticlePloS one2012

Hippo pathway phylogenetics predicts monoubiquitylation of Salvador and Merlin/Nf2.

Robert G Wisotzkey, Charlotte E Konikoff, Stuart J Newfeld

Abstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Robert G WisotzkeyNextBio, Santa Clara, California, United States of America.
Charlotte E Konikoff
Stuart J Newfeld

Funding

Computatonal Analysis of Gene Expression Pattern ImagesR01HG002516 · NHGRI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI KUMAR, SUDHIR · 2003 to 2013
$5.3M
NHGRI NIH HHS HG002516NHGRI NIH HHS R01 HG002516
6 · The paper itself

Abstract

Recently we employed phylogenetics to predict that the cellular interpretation of TGF-β signals is modulated by monoubiquitylation cycles affecting the Smad4 signal transducer/tumor suppressor. This prediction was subsequently validated by experiments in flies, frogs and mammalian cells. Here we apply a phylogenetic approach to the Hippo pathway and predict that two of its signal transducers, Salvador and Merlin/Nf2 (also a tumor suppressor) are regulated by monoubiquitylation. This regulatory mechanism does not lead to protein degradation but instead serves as a highly efficient "off/on" switch when the protein is subsequently deubiquitylated. Overall, our study shows that the creative application of phylogenetics can predict new roles for pathway components and new mechanisms for regulating intercellular signaling pathways.

Indexed as

AnimalsBayes TheoremCell Cycle ProteinsDrosophila melanogasterDrosophila ProteinsHippo KinasesHumansIntracellular Signaling Peptides and ProteinsLikelihood FunctionsLysineNeurofibromin 2PhosphorylationPhylogenyProtein Serine-Threonine KinasesSignal TransductionSmad4 ProteinCell Cycle ProteinsDrosophila ProteinsHippo Kinaseshpo protein, DrosophilaIntracellular Signaling Peptides and ProteinsLysineNeurofibromin 2Protein Serine-Threonine KinasesSAV1 protein, humansav protein, DrosophilaSmad4 ProteinTransforming Growth Factor betaUbiquitin

Identifiers

PMID23272121
PMCPMC3522738

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.