Evidence map›Paper›PMID 23269673›Full record

ArticleThe Journal of biological chemistry2013

Catalytic intermediates of inducible nitric-oxide synthase stabilized by the W188H mutation.

Joseph Sabat, Tsuyoshi Egawa, Changyuan Lu, Dennis J Stuehr, Gary J Gerfen, Denis L Rousseau, Syun-Ru Yeh

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Alternative modes of OJournal of inorganic biochemistry · 2020
    Article
  3. Article
  4. Article
  5. Cryptochrome in sponges: a key molecule linking photoreception with phototransduction.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Joseph SabatDepartment of Physiology and Biophysics, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Tsuyoshi Egawa
Changyuan Lu
Dennis J Stuehr
Gary J Gerfen
Denis L Rousseau
Syun-Ru Yeh
Albert Einstein College of Medicine · USCleveland Clinic Lerner College of Medicine · USYeshiva University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007288 · NIGMS · YESHIVA UNIVERSITY · PI AKABAS, MYLES H. · 1985 to 2022
$35.6M
Structural Determinants Of Ceruloplasmin Inflammatory ActivityP01HL076491 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI HOOVER-PLOW, JANE LEE · 2004 to 2019
$27.3M
CONTROL MECHANISMS OF THE NITRIC OXIDE SYNTHASESR01GM051491 · NIGMS · CLEVELAND CLINIC LERNER COM-CWRU · PI STUEHR, DENNIS J · 1994 to 2016
$5.1M
BIOCHEMISTRY OF NITRIC OXIDE SYNTHESISR01CA053914 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI STUEHR, DENNIS J · 1996 to 2010
$3.1M
CATALYTIC MECHANISMS AND PROPERTIES OF HEME PROTEINSR01GM054806 · NIGMS · YESHIVA UNIVERSITY · PI ROUSSEAU, DENIS L. · 1997 to 2008
$3.1M
Mechanisms of Energy Transduction in Heme-Copper OxidasesR01GM098799 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI ROUSSEAU, DENIS L. · 2011 to 2014
$1.8M
Catalytic and Inhibitory Mechanisms in Indoleamine 2,3-dioxygenaseR01GM086482 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI YEH, SYUN-RU · 2010 to 2013
$1.3M
Mechanisms and Regulation of Inducible Nitric Oxide SynthaseF31GM078679 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI SABAT, JOSEPH EDWARD · 2008 to 2010
$137k
BIOCHEMISTRY OF MACROPHAGE NITRIC OXIDE SYNTHESISR29CA053914 · NCI · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI STUEHR, DENNIS J · 1991 to 1995
–
NCI NIH HHS CA53914NCI NIH HHS R01 CA053914NHLBI NIH HHS HL76491NHLBI NIH HHS P01 HL076491NIGMS NIH HHS F31 GM078679NIGMS NIH HHS F31GM078679NIGMS NIH HHS GM51491NIGMS NIH HHS GM54806NIGMS NIH HHS R01 GM051491NIGMS NIH HHS R01 GM054806NIGMS NIH HHS R01 GM086482NIGMS NIH HHS R01 GM098799NIGMS NIH HHS T32 GM007288
6 · The paper itself

Abstract

Nitric-oxide synthase (NOS) catalyzes nitric oxide (NO) synthesis via a two-step process: L-arginine (L-Arg) → N-hydroxy-L-arginine → citrulline + NO. In the active site the heme is coordinated by a thiolate ligand, which accepts a H-bond from a nearby tryptophan residue, Trp-188. Mutation of Trp-188 to histidine in murine inducible NOS was shown to retard NO synthesis and allow for transient accumulation of a new intermediate with a Soret maximum at 420 nm during the L-Arg hydroxylation reaction (Tejero, J., Biswas, A., Wang, Z. Q., Page, R. C., Haque, M. M., Hemann, C., Zweier, J. L., Misra, S., and Stuehr, D. J. (2008) J. Biol. Chem. 283, 33498-33507). However, crystallographic data showed that the mutation did not perturb the overall structure of the enzyme. To understand how the proximal mutation affects the oxygen chemistry, we carried out biophysical studies of the W188H mutant. Our stopped-flow data showed that the 420-nm intermediate was not only populated during the L-Arg reaction but also during the N-hydroxy-L-arginine reaction. Spectroscopic data and structural analysis demonstrated that the 420-nm intermediate is a hydroxide-bound ferric heme species that is stabilized by an out-of-plane distortion of the heme macrocycle and a cation radical centered on the tetrahydrobiopterin cofactor. The current data add important new insights into the previously proposed catalytic mechanism of NOS (Li, D., Kabir, M., Stuehr, D. J., Rousseau, D. L., and Yeh, S. R. (2007) J. Am. Chem. Soc. 129, 6943-6951).

Indexed as

Mutation, MissenseAmino Acid SubstitutionAnimalsCatalysisCrystallography, X-RayEnzyme StabilityHemeIronMiceNitric OxideNitric Oxide Synthase Type IIHemeIronNitric OxideNitric Oxide Synthase Type IINos2 protein, mouse

Identifiers

PMID23269673
PMCPMC3816742
OpenAlexW2063944286

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.