Evidence map›Paper›PMID 23269432›Full record

ArticleMolecules and cells2013

SUMO modification of NZFP mediates transcriptional repression through TBP binding.

Mijin Kim, Zifan Chen, Myoung Sup Shim, Myoung Sook Lee, Ji Eon Kim, Young Eun Kwon, Tack Jin Yoo, Jin Young Kim, Je Young Bang, Bradley A Carlson and 3 more

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In one paragraph

Article in Molecules and cells, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Mijin KimSchool of Biological Sciences, Institute of Molecular Biology and Genetics, Seoul National University, Seoul 151-742, Korea.
Zifan Chen
Myoung Sup Shim
Myoung Sook Lee
Ji Eon Kim
Young Eun Kwon
Tack Jin Yoo
Jin Young Kim
Je Young Bang
Bradley A Carlson
Jae Hong Seol
Dolph L Hatfield
Byeong Jae Lee
Seoul National University · KRNational Institutes of Health · US

Funding

Biosynthesis of Selenocysteine and Its Incorporation into ProteinZIABC010767 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI HATFIELD, DOLPH · 2009 to 2014
$2.0M
6 · The paper itself

Abstract

The negatively regulating zinc finger protein (NZFP) is an essential transcription repressor required for early development during gastrulation in Xenopus laevis. In this study, we found that NZFP interacts with the small ubiquitin-like modifier (SUMO) conjugation E2 enzyme, Ubc9, and contains three putative SUMO conjugation sites. Studies with NZFP mutants containing mutations at the putative SUMO conjugation sites showed that these sites were able to be modified independently with SUMO. NZFP was found to be localized in the same nuclear bodies with SUMO-1. However, sumoylation of NZFP did not play a role either in the translocation of NZFP into the nucleus or on nuclear body formation. While wild type NZFP showed significant transcriptional repression, SUMO-conjugation site mutants manifested a decrease in transcriptional repression activity which is reversely proportional to the amount of sumoylation. The sumoylation defective mutant lost its TBP binding activity, while wild type NZFP interacted with TBP and inhibited transcription complex formation. These results strongly suggest that the sumoylation of NZFP facilitates NZFP to bind to TBP and the NZFP/TBP complex then represses the transcription of the target gene by inhibiting basal transcription complex formation.

Indexed as

Protein Processing, Post-TranslationalTranscription, GeneticAnimalsBlotting, WesternCell NucleusCells, CulturedChlorocebus aethiopsCOS CellsImmunoenzyme TechniquesImmunoprecipitationRecombinant ProteinsRepressor ProteinsSUMO-1 ProteinSumoylationTATA-Box Binding ProteinTwo-Hybrid System TechniquesRecombinant ProteinsRepressor ProteinsSUMO-1 ProteinTATA-Box Binding ProteinZNF182 protein, Xenopus

Identifiers

PMID23269432
PMCPMC3887854
OpenAlexW2056012510

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.