ReviewArchives of biochemistry and biophysics2013
Using simulations to provide the framework for experimental protein folding studies.
Review in Archives of biochemistry and biophysics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- Stability and Conformational Dynamics of Interferons: Structural Insights into the Urea- and Guanidinium Chloride-Induced Unfolding.ACS omega · 2026Article
- Review
- The isolated C-terminal nuclear localization sequence of the breast cancer metastasis suppressor 1 is disordered.Archives of biochemistry and biophysics · 2019Article
- The Cyanobacterial Ribosomal-Associated Protein LrtA fromInternational journal of molecular sciences · 2018Article
- Elucidation of the structural stability and dynamics of heterogeneous intermediate ensembles in unfolding pathway of the N-terminal domain of TDP-43.RSC advances · 2018Article
- Identification by Molecular Docking ofHomoisoflavones from Leopoldia comosa as Ligands of Estrogen Receptors.Molecules (Basel, Switzerland) · 2018Article
- Intrinsically disordered inhibitor of glutamine synthetase is a functional protein with random-coil-like pKProtein science : a publication of the Protein Society · 2017Article
- New Dynamic Rotamer Libraries: Data-Driven Analysis of Side-Chain Conformational Propensities.Structure (London, England : 1993) · 2016Article
- The effect of ligands on the thermal stability of sulfotransferases: a molecular dynamics simulation study.Journal of molecular modeling · 2015Article
- Decoding Structural Properties of a Partially Unfolded Protein Substrate: En Route to Chaperone Binding.PLoS computational biology · 2015Article
- Structural evaluation and analyses of tumor differentiation factor.The protein journal · 2013Article
- Article
Corrections and comments
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Authors and funding
2 authors.
Funding
Abstract
Molecular dynamics simulations are a powerful theoretical tool to model the protein folding process in atomistic details under realistic conditions. Combined with a number of experimental techniques, simulations provide a detailed picture of how a protein folds or unfolds in the presence of explicit solvent and other molecular species, such as cosolvents, osmolytes, cofactors, active binding partners or inert crowding agents. The denaturing effects of temperature, pressure and external mechanical forces can also be probed. Qualitative and quantitative agreement with experiment contributes to a comprehensive molecular picture of protein states along the folding/unfolding pathway. The variety of systems examined reveals key features of the protein folding process.
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Registered trials
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