Evidence map›Paper›PMID 23263256›Full record

ArticleCurrent microbiology2013

Assessment of cagE and babA mRNA expression during morphological conversion of Helicobacter pylori from spiral to coccoid.

Farkhondeh Poursina, Jamshid Faghri, Sharareh Moghim, Hamid Zarkesh-Esfahani, Bahram Nasr-Esfahani, Hossein Fazeli, Akbar Hasanzadeh, Hajieh Ghasemian Safaei

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Article in Current microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Trial
  2. Determination of GenesThe Yale journal of biology and medicine · 2025
    Article
  3. Article
  4. Review
  5. Article
  6. [The Recurrence ofThe Korean journal of helicobacter and upper gastrointestinal research · 2023
    Article
  7. International journal of molecular sciences · 2023
    Article
  8. International journal of molecular sciences · 2022
    Review
  9. Research progress in theZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2021
    Article
  10. World journal of gastroenterology · 2021
    Article
  11. Article
  12. Cells · 2020
    Review
  13. Clinical and laboratory importance of detectingPrzeglad gastroenterologiczny · 2020
    Review
  14. Helicobacter pylori recrudescence and its influencing factors.Journal of cellular and molecular medicine · 2019
    Review
  15. Article
  16. Article
  17. Significance of dormant forms ofWorld journal of gastroenterology · 2017
    Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Farkhondeh PoursinaDepartment of Microbiology, Isfahan University of Medical Sciences, Isfahan, Iran.
Jamshid Faghri
Sharareh Moghim
Hamid Zarkesh-Esfahani
Bahram Nasr-Esfahani
Hossein Fazeli
Akbar Hasanzadeh
Hajieh Ghasemian Safaei

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Helicobacter pylori (H. Pylori) is an actively dividing spiral bacterium that changes to coccoid morphology under stressful environments. The infectivity of the coccoids is still controversial. The aim of this study was to determine the viability and expression of two important virulence genes (babA and cagE), in antibiotic-induced coccoid forms. Three strains of H. pylori, the standard 26695 and two clinical isolates (p1, p2) were converted to coccoid form by amoxicillin. Coccoids were identified according to Gram-staining and microscopic morphology. The viability of the cells was analyzed by flow cytometry. The expression of cagE and babA in coccoid forms were evaluated and compared to the spirals by quantitative PCR assay. The coccoid forms were developed after 72 h exposure of H. pylori to ½ MIC of amoxicillin, and the conversion form was completed (100 %) at 144 h in all of three isolates. Flow cytometry analyses showed that the majority of the induced coccoids (90-99.9 %) were viable. Expression of cagE and babA was seen in coccoids; however, in lower rate (cagE, ~3-fold and babA, ~10-fold) than these in spiral forms. Coccoid forms of two clinical isolates significantly expressed higher rate of cagE and babA than standard 26695 strain (P = 0.01). These results suggest that the induced coccoid form of H. pylori is not a passive entity but can actively infect the human by expression of the virulence genes for long time in stomach and probably play a role in chronic and severe disease.

Indexed as

Gene Expression ProfilingGene Expression Regulation, BacterialAdhesins, BacterialAmoxicillinAnti-Bacterial AgentsBacterial ProteinsFlow CytometryHelicobacter InfectionsHelicobacter pyloriHumansMicrobial ViabilityMicroscopyReal-Time Polymerase Chain ReactionRNA, MessengerAdhesins, BacterialAmoxicillinAnti-Bacterial AgentsBabA protein, Helicobacter pyloriBacterial ProteinsPicB protein, Helicobacter pyloriRNA, Messenger

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.