Evidence map›Paper›PMID 23262684›Full record

ArticleOptics express2012

Three dimensional HiLo-based structured illumination for a digital scanned laser sheet microscopy (DSLM) in thick tissue imaging.

Dipanjan Bhattacharya, Vijay Raj Singh, Chen Zhi, Peter T C So, Paul Matsudaira, George Barbastathis

Abstract read
In one paragraph

Article in Optics express, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Three-dimensional image cytometer based on widefield structured light microscopy and high-speed remote depth scanning.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2015
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dipanjan BhattacharyaSingapore-MIT Alliance for Research and Technology (SMART) Centre, Singapore. dipanjan@smart.mit.edu
Vijay Raj Singh
Chen Zhi
Peter T C So
Paul Matsudaira
George Barbastathis

Funding

Wide-Field Short-Wave Infrared (SWIR) multiphoton (MP) tissue imagingP41EB015871 · NIBIB · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SO, PETER T. · 2012 to 2021
$11.3M
A Spatial-Spectral Volume Holographic Imaging System for Ex-Vivo and In-Vivo CancR01CA134424 · NCI · UNIVERSITY OF ARIZONA · PI KOSTUK, RAYMOND K · 2009 to 2013
$2.0M
NCI NIH HHS 1R01CA134424-01A1NCI NIH HHS R01 CA134424NIBIB NIH HHS P41 EB015871
6 · The paper itself

Abstract

Laser sheet based microscopy has become widely accepted as an effective active illumination method for real time three-dimensional (3D) imaging of biological tissue samples. The light sheet geometry, where the camera is oriented perpendicular to the sheet itself, provides an effective method of eliminating some of the scattered light and minimizing the sample exposure to radiation. However, residual background noise still remains, limiting the contrast and visibility of potentially interesting features in the samples. In this article, we investigate additional structuring of the illumination for improved background rejection, and propose a new technique, "3D HiLo" where we combine two HiLo images processed from orthogonal directions to improve the condition of the 3D reconstruction. We present a comparative study of conventional structured illumination based demodulation methods, namely 3Phase and HiLo with a newly implemented 3D HiLo approach and demonstrate that the latter yields superior signal-to-background ratio in both lateral and axial dimensions, while simultaneously suppressing image processing artifacts.

Indexed as

AnimalsArtifactsDevelopmental BiologyEquipment DesignImaging, Three-DimensionalLightingMicroscopy, ConfocalModels, TheoreticalZebrafish

Identifiers

PMID23262684
PMCPMC3601593

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.