Evidence map›Paper›PMID 23262283›Full record

ArticleAnalytical biochemistry2013

Modeling complex equilibria in isothermal titration calorimetry experiments: thermodynamic parameters estimation for a three-binding-site model.

Vu H Le, Robert Buscaglia, Jonathan B Chaires, Edwin A Lewis

Abstract read
In one paragraph

Article in Analytical biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

42 citing papers in PubMed.

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  16. Isothermal Titration Calorimetry.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Vu H LeDepartment of Chemistry, Mississippi State University, Mississippi State, MS 39762, USA.
Robert Buscaglia
Jonathan B Chaires
Edwin A Lewis

Funding

SPECIFICITY OF INTERCALATION REACTIONSR01CA035635 · NCI · UNIVERSITY OF MISSISSIPPI MEDICAL CENTER · PI CHAIRES, JONATHAN B. · 1985 to 2014
$2.0M
NCI NIH HHS CA35635NCI NIH HHS R01 CA035635
6 · The paper itself

Abstract

Isothermal titration calorimetry (ITC) is a powerful technique that can be used to estimate a complete set of thermodynamic parameters (e.g., K(eq) (or ΔG), ΔH, ΔS, and n) for a ligand-binding interaction described by a thermodynamic model. Thermodynamic models are constructed by combining equilibrium constant, mass balance, and charge balance equations for the system under study. Commercial ITC instruments are supplied with software that includes a number of simple interaction models, for example, one binding site, two binding sites, sequential sites, and n-independent binding sites. More complex models, for example, three or more binding sites, one site with multiple binding mechanisms, linked equilibria, or equilibria involving macromolecular conformational selection through ligand binding, need to be developed on a case-by-case basis by the ITC user. In this paper we provide an algorithm (and a link to our MATLAB program) for the nonlinear regression analysis of a multiple-binding-site model with up to four overlapping binding equilibria. Error analysis demonstrates that fitting ITC data for multiple parameters (e.g., up to nine parameters in the three-binding-site model) yields thermodynamic parameters with acceptable accuracy.

Indexed as

CalorimetryModels, ChemicalThermodynamicsMonte Carlo Method

Identifiers

PMID23262283
PMCPMC3572830

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.