Evidence map›Paper›PMID 23261817›Full record

ArticleMutation research

Collaborating functions of BLM and DNA topoisomerase I in regulating human rDNA transcription.

Patrick M Grierson, Samir Acharya, Joanna Groden

Open access · greenAbstract read
In one paragraph

Article in Mutation research. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Human RecQ Helicases in DNA Double-Strand Break Repair.Frontiers in cell and developmental biology · 2021
    Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. The Nucleolus: In Genome Maintenance and Repair.International journal of molecular sciences · 2017
    Review
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Linker histone H1 and protein-protein interactions.Biochimica et biophysica acta · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Patrick M GriersonDepartment of Microbiology, Immunology and Medical Genetics, The Ohio State University College of Medicine, Columbus, OH 43210, USA.
Samir AcharyaDepartment of Microbiology, Immunology and Medical Genetics, The Ohio State University College of Medicine, Columbus, OH 43210, USA. Electronic address: samir.acharya@osumc.edu.
Joanna GrodenDepartment of Microbiology, Immunology and Medical Genetics, The Ohio State University College of Medicine, Columbus, OH 43210, USA.
The Ohio State University · US

Funding

Chemistry-Biology Interface Training ProgramT32GM008505 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BLACKWELL, HELEN E. · 1993 to 2023
$9.8M
The Ohio State University Center for Clinical and Translational Science (UL1)UL1TR000090 · NCATS · OHIO STATE UNIVERSITY · PI JACKSON, REBECCA D · 2012 to 2013
$7.9M
Functions of the BLM Helicase in Telomere MaintenanceR01CA117898 · NCI · OHIO STATE UNIVERSITY · PI GRODEN, JOANNA LOUISE · 2008 to 2012
$1.5M
The Ohio State University Center for Clinical and Translational Science (KL2)KL2TR000112 · NCATS · OHIO STATE UNIVERSITY · PI JACKSON, REBECCA D · 2012 to 2013
$855k
The Ohio State University Center for Clinical and Translational Science (TL1)TL1TR000091 · NCATS · OHIO STATE UNIVERSITY · PI JACKSON, REBECCA D · 2012 to 2013
$384k
NCATS NIH HHS KL2 TR000112NCATS NIH HHS TL1 TR000091NCATS NIH HHS UL1 TR000090NCI NIH HHS CA117898NCI NIH HHS R01 CA117898NIGMS NIH HHS T32 GM008505
6 · The paper itself

Abstract

Bloom's syndrome (BS) is an inherited disorder caused by loss of function of the recQ-like BLM helicase. It is characterized clinically by severe growth retardation and cancer predisposition. BLM localizes to PML nuclear bodies and to the nucleolus; its deficiency results in increased intra- and inter-chromosomal recombination, including hyper-recombination of rDNA repeats. Our previous work has shown that BLM facilitates RNA polymerase I-mediated rRNA transcription in the nucleolus (Grierson et al., 2012 [18]). This study uses protein co-immunoprecipitation and in vitro transcription/translation (IVTT) to identify a direct interaction of DNA topoisomerase I with the C-terminus of BLM in the nucleolus. In vitro helicase assays demonstrate that DNA topoisomerase I stimulates BLM helicase activity on a nucleolar-relevant RNA:DNA hybrid, but has an insignificant effect on BLM helicase activity on a control DNA:DNA duplex substrate. Reciprocally, BLM enhances the DNA relaxation activity of DNA topoisomerase I on supercoiled DNA substrates. Our study suggests that BLM and DNA topoisomerase I function coordinately to modulate RNA:DNA hybrid formation as well as relaxation of DNA supercoils in the context of nucleolar transcription.

Indexed as

Transcription, GeneticBloom SyndromeCell LineCell Line, TumorCell NucleolusDNA, RibosomalDNA Topoisomerases, Type IHEK293 CellsHumansMCF-7 CellsRecQ HelicasesBloom syndrome proteinDNA, RibosomalDNA Topoisomerases, Type IRecQ HelicasesTOP1 protein, human

Identifiers

PMID23261817
PMCPMC3636178
OpenAlexW2040615258

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.